DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snm1 and AT2G45700

DIOPT Version :10

Sequence 1:NP_649548.1 Gene:Snm1 / 40669 FlyBaseID:FBgn0037338 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_182094.1 Gene:AT2G45700 / 819178 AraportID:AT2G45700 Length:723 Species:Arabidopsis thaliana


Alignment Length:423 Identity:135/423 - (31%)
Similarity:218/423 - (51%) Gaps:41/423 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 SAIASPCEKSSDVQA--------------TKFRTPETSMPEAKLSNSSLDLVEISPGPNKSPTNN 231
            |.:..|...|::|||              .|..|.:.|.|:...:|..  :.|..||.....|. 
plant   297 SGVRDPFASSAEVQAQSHCTSGHVTERQRDKSTTRKASEPKKPTANKL--ITEFFPGQATEGTK- 358

  Fly   232 FYRSSPAAITKESPLGKNSKKGTVR--KQRKPKPCPPYKVVEGTSFCVDGFQFGEIEGVTHYFLT 294
             .|::|..:.::||...:|::...|  ...|.|..|.:..:.||.|.||.|:: ......|:|||
plant   359 -IRTAPKPVAEKSPSDSSSRRAVRRNGNNGKSKVIPHWNCIPGTPFRVDAFKY-LTRDCCHWFLT 421

  Fly   295 HFHADHYIGLTKKFCH-PLYVSPISARLVRTFIKLDETHIHEIDVDQTLDVDGVQVTALEANHCP 358
            |||.|||.||||.|.| .:|.|.::|:||...|.:....:..:|:.|.:::.|:.||..:|||||
plant   422 HFHLDHYQGLTKSFSHGKIYCSLVTAKLVNMKIGIPWERLQVLDLGQKVNISGIDVTCFDANHCP 486

  Fly   359 GALMFFFKLSSGECILHTGDFRASADMESLPIFWNHSNIDLLYLDTTYMNKNYDFCHQSESVDRA 423
            |::|..|:.::|:.:|||||||.|.:|.:..|   .|:|..|.|||||.|..|||..|...:...
plant   487 GSIMILFEPANGKAVLHTGDFRYSEEMSNWLI---GSHISSLILDTTYCNPQYDFPKQEAVIQFV 548

  Fly   424 VDLVR--AFLEKNAAKRILIVCGSYVIGKEKIWLALAKEFTMRVWTESNRSTAVRCLNWPDLD-S 485
            |:.::  ||..|.     |.:.|||.||||:::|.:|:....:::....:...:.||.:...| .
plant   549 VEAIQAEAFNPKT-----LFLIGSYTIGKERLFLEVARVLREKIYINPAKLKLLECLGFSKDDIQ 608

  Fly   486 VLTEDRSGANLHVIAMGKI-SYPSLVDYFTEFEDQYDMLLGIRPSGWE--KNSKPSYGKRI--ST 545
            ..|.....:::||:.:..: |:..|......:.::|.:::...|:||.  |..|.|.|:|:  .|
plant   609 WFTVKEEESHIHVVPLWTLASFKRLKHVANRYTNRYSLIVAFSPTGWTSGKTKKKSPGRRLQQGT 673

  Fly   546 I---GIEYSEHSSYKELERFVRFLKPKRVISTV 575
            |   .:.||||||:.||:.||:.:.|:.:|.:|
plant   674 IIRYEVPYSEHSSFTELKEFVQKVSPEVIIPSV 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snm1NP_649548.1 SNM1A-1C-like_MBL-fold 252..408 CDD:293831 64/158 (41%)
DRMBL 481..578 CDD:429512 30/104 (29%)
AT2G45700NP_182094.1 SAM_1 244..300 CDD:425739 1/2 (50%)
SNM1A-1C-like_MBL-fold 381..534 CDD:293831 64/156 (41%)
DRMBL 605..710 CDD:429512 30/102 (29%)

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