Protein Alignment Snm1 and CPSF73-II

DIOPT Version :10

• Sequence 1: NP_649548.1
• Gene: Snm1 / 40669
• FlyBaseID: FBgn0037338
• Length: 763
• Species: Drosophila melanogaster
• Sequence 2: NP_178282.2
• Gene: CPSF73-II / 814702
• AraportID: AT2G01730
• Length: 613
• Species: Arabidopsis thaliana
• Alignment Length: 512
• Identity: 109/512 - (21%)
• Similarity: 179/512 - (34%)
• Gaps: 138/512 - (26%)

  Fly   293 LTHFHADHYIGLTKKFCH------PLYVS----PISARLVRTF--IKLDE---------THIHE- 335
            :||||.|| :|....|..      |:|:|    .:|..::..:  :.:|.         |||..
plant    65 ITHFHMDH-VGALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEELFTTTHIANC 128

  Fly   336 ------IDVDQTLDVD-GVQVTALEANHCPGALMFFFKLSSGECILHTGDFRASADMESLPIFWN 393
                  ||:.||:.|| .:|:.|..|.|..||:|.:.|:... .|::|||:..:.|        .
plant   129 MKKVIAIDLKQTIQVDEDLQIRAYYAGHVLGAVMVYAKMGDA-AIVYTGDYNMTTD--------R 184

  Fly   394 H---SNIDLLYLDTTYMNKNYDFCHQSESVDRAVDLVRAFLEKNAAKRILIVCGSYVIGKEKIWL 455
            |   :.||.|.||.......|....:.....|..:.::| :.|..|.....:..|:.:|:.:...
plant   185 HLGAAKIDRLQLDLLISESTYATTIRGSKYPREREFLQA-VHKCVAGGGKALIPSFALGRAQELC 248

  Fly   456 ALAKEFTMRV-------------------------WTESNRSTAVRCLNWPDLDSVLTEDRS--- 492
            .|..::..|:                         ||..|........|..|..:|...|||
plant   249 MLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQNVKEKHNTHNPFDFKNVKDFDRSLIH 313

  Fly   493 ----------------GANLHVI---AMGKISYPSLVDYFTEFEDQYDMLLGIRPSGWEKNSKPS 538
                            |.:|.|.   |...::..:|..|.......:.::.| :|:..:..:...
plant   314 APGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGHKLMAG-KPTTVDLYNGTK 377

  Fly   539 YGKRISTIGIEYSEHSSYKELERFVRFLKPKRVISTVPVGRDLYVTGEVPIRWYKYEGRASMLRT 603
            ...|.....:.:|.|:..|.:....:||.||.|:         .|.||.|......|...|.|..
plant   378 VDVRCKVHQVAFSPHTDAKGIMDLTKFLSPKNVV---------LVHGEKPSMMILKEKITSELDI 433

  Fly   604 G-FQPS-------IST----------FLATPKRAFAKFSADTEMFLSP--------VDENASKGS 642
            . |.|:       .||          ||.:......|||..|::.::.        |.|.:.|..
plant   434 PCFVPANGETVSFASTTYIKANASDMFLKSCSNPNFKFSNSTQLRVTDHRTADGVLVIEKSKKAK 498

  Fly   643 EDKKDDDRESVVPTNHVTIISDTPEECFQTDSKIPVKNEPLAPDTSPNSEIVAQLNA 699
            ...:|:..|.:...|||..::    .|    ..:.||.|....|.    :::.||:|
plant   499 IVHQDEISEVLHEKNHVVSLA----HC----CPVKVKGESEDDDV----DLIKQLSA 543

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Snm1	NP_649548.1	SNM1A-1C-like_MBL-fold	252..408	CDD:293831	41/146 (28%)
		DRMBL	481..578	CDD:429512	22/118 (19%)
CPSF73-II	NP_178282.2	COG1782	1..444	CDD:441388	85/399 (21%)
		INTS11-like_MBL-fold	5..203	CDD:293849	41/147 (28%)