DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snm1 and DCLRE1B

DIOPT Version :10

Sequence 1:NP_649548.1 Gene:Snm1 / 40669 FlyBaseID:FBgn0037338 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_073747.1 Gene:DCLRE1B / 64858 HGNCID:17641 Length:532 Species:Homo sapiens


Alignment Length:454 Identity:123/454 - (27%)
Similarity:194/454 - (42%) Gaps:91/454 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 VVEGTSFCVDGFQFGEIEGVTHYFLTHFHADHYIGLTKKFCHPLYVSPISARLVRTFIKLDETHI 333
            ::..|...||.:..........:||:|.|:||.:||:..:..|||.|||:|.|:...:::.:..|
Human     5 LIPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWARPLYCSPITAHLLHRHLQVSKQWI 69

  Fly   334 HEIDVDQT----LDVDG---VQVTALEANHCPGALMFFFKLSSGECILHTGDFRASADMESLPIF 391
            ..::|.::    ||..|   :.||.|:||||||::||.|:...| .||:|||||.:..|...|..
Human    70 QALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFRYTPSMLKEPAL 133

  Fly   392 WNHSNIDLLYLDTTYMNKNYDFCHQSESVDRAVDLVRAFLEKNAAKRILIVCGSYVIGKEKIWLA 456
            .....|..||||.|..|.......:.|:..:.|.|:|...:.|      |..|.|.:|||.:...
Human   134 TLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQHN------IKIGLYSLGKESLLEQ 192

  Fly   457 LAKEFTMRVWTESNRSTAVRCLNWPDLDSVLTEDRSGANLHVIAMGKISYPSLVDYFTEFEDQYD 521
            ||.||...|.....|...|:.|...|:.:|  |:::| .:|.:...:|.:.:::.:     :|..
Human   193 LALEFQTWVVLSPRRLELVQLLGLADVFTV--EEKAG-RIHAVDHMEICHSNMLRW-----NQTH 249

  Fly   522 MLLGIRPSGWEKNSKPSYGKRISTIGIEYSEHSSYKELERFVRFLKPKRVISTV---PVGRDLYV 583
            ..:.|.|:     |:..:........|.||:||||.||..||..|||.:|:..|   |.|     
Human   250 PTIAILPT-----SRKIHSSHPDIHVIPYSDHSSYSELRAFVAALKPCQVVPIVSRRPCG----- 304

  Fly   584 TGEVPIRWYKYEGRASMLRTGFQPSISTFLATP-----------------------KRAFAKFSA 625
                                |||.|:|..::.|                       :|...:...
Human   305 --------------------GFQDSLSPRISVPLIPDSVQQYMSSSSRKPSLLWLLERRLKRPRT 349

  Fly   626 DTEMFLSPVDENA--SKGSEDKKDDDRESVVPTNHVTIISDTPEECFQTDSKIPVK-NEPLAPD 686
            ...:|.|| :|:|  |:...|.|...:|.:.|         .|.:..:..|..|:: .:.|.||
Human   350 QGVVFESP-EESADQSQADRDSKKAKKEKLSP---------WPADLEKQPSHHPLRIKKQLFPD 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snm1NP_649548.1 SNM1A-1C-like_MBL-fold 252..408 CDD:293831 52/145 (36%)
DRMBL 481..578 CDD:429512 27/99 (27%)
DCLRE1BNP_073747.1 SNM1A-1C-like_MBL-fold 6..151 CDD:293831 52/145 (36%)
DRMBL 216..299 CDD:429512 25/95 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..392 12/51 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 453..482
apollo_TRF2_binding 496..529 CDD:212560
TBM 496..511
Blue background indicates that the domain is not in the aligned region.

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