DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snm1 and Dclre1a

DIOPT Version :10

Sequence 1:NP_649548.1 Gene:Snm1 / 40669 FlyBaseID:FBgn0037338 Length:763 Species:Drosophila melanogaster
Sequence 2:XP_006527280.1 Gene:Dclre1a / 55947 MGIID:1930042 Length:1047 Species:Mus musculus


Alignment Length:585 Identity:188/585 - (32%)
Similarity:287/585 - (49%) Gaps:75/585 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 PTPTIENRTPDKKRAGRTRAASTTKKVRPKTEACPII------ASTAFKRSSKKTPLPGQMRIDS 85
            |..|.....|.:|..|:......|:.   :|...|..      |:.|.:.:.|::.:|    :|.
Mouse   484 PLLTRARSKPLEKEGGKCLPLHPTQS---QTRGSPRKGLGAPGANCACRNAQKRSSMP----LDK 541

  Fly    86 FFTSAVKNYKVKSSSSCRKVDPPLDKRKVSTKGRKRLFEESTTTSSAFTG---KLDAKPSEKRVQ 147
            ...::..:.|...|...:||...:|.........||  :|::...||..|   .....|::||  
Mouse   542 PLGTSPSSPKCSPSQPSKKVMKQMDIGVFFGLPPKR--QETSLRESASEGPNVSPVVSPNQKR-- 602

  Fly   148 PSRRAKGKENASLSEV-----------HVIDLCSEDEQTIKRKPSAIAS----PCEKSSDVQATK 197
             .|..|.|..:|||::           |.:.|..|..|..:::.....|    ||::.|.     
Mouse   603 -PRLCKRKAQSSLSDLEFDAKNLNESQHSVGLSGEKRQHRRKRHKTSNSPREGPCQRRSG----- 661

  Fly   198 FRTPETSMPEAKLSNSSLDLVEISPGPNKSPTNNFYRSSPAAITK-ESPLGKNSKKGTVRKQRKP 261
                      ..::|..|..|.:|.|      ..|.|.:.....: ...:.::|..|.||     
Mouse   662 ----------HLMNNPELGPVILSKG------KAFVRRTRGRTQRGNMNISESSGAGEVR----- 705

  Fly   262 KPCPPYKVVEGTSFCVDGFQFGEIEGVTHYFLTHFHADHYIGLTKKFCHPLYVSPISARLVRTFI 326
            :.||.||.:.||.|.||.||:|||||.|.|||||||:|||.||:|.|..|:|.|.|:..|::..:
Mouse   706 RTCPFYKRIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYAGLSKDFTRPVYCSEITGNLLKKKL 770

  Fly   327 KLDETHIHEIDVDQTLDVDGVQVTALEANHCPGALMFFFKLSSGECILHTGDFRASADMESLPIF 391
            ::.|.:|.::.:|....||.|:|..|:|||||||.|..|:|.:|..|||||||||...||...:.
Mouse   771 RVQEQYIRQLPMDTECVVDSVKVVLLDANHCPGATMILFQLPNGAVILHTGDFRADPSMERSRLA 835

  Fly   392 WNHSNIDLLYLDTTYMNKNYDFCHQSESVDRAVDLVRAFLEKNAAKRILIVCGSYVIGKEKIWLA 456
            ..  .:..|:|||||.:..|.|..|.|.:..|::  .||.......|.|:|||:|.|||||::||
Mouse   836 GR--KVHTLFLDTTYCSPEYTFPSQQEVIQFAIN--TAFEAVTLNPRALVVCGTYCIGKEKVFLA 896

  Fly   457 LAKEFTMRVWTESNRSTAVRCLNWPDLDSVLTEDRSGANLHVIAMGKISYPSLVDYFTEFEDQYD 521
            :|.....:|.....:...::|||.|::.|::|.|...:.:|::.|.:|::..|..:..:...:||
Mouse   897 IADVLGSKVGMSQEKYKTLQCLNIPEVSSLITTDMCDSLVHLLPMMQINFKGLQSHLKKCGGKYD 961

  Fly   522 MLLGIRPSGWEKNSK--------PSYGKRISTIGIEYSEHSSYKELERFVRFLKPKRVISTVPVG 578
            .:|..||:||..::.        |.....||..||.|||||||.|::|||::|||:::|.||.||
Mouse   962 QILAFRPTGWTHSNNITSTADIIPQTRGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVG 1026

  Fly   579  578
            Mouse  1027  1026

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snm1NP_649548.1 SNM1A-1C-like_MBL-fold 252..408 CDD:293831 75/155 (48%)
DRMBL 481..578 CDD:429512 37/104 (36%)
Dclre1aXP_006527280.1 metallo-hydrolase-like_MBL-fold 696..851 CDD:451500 76/161 (47%)
DRMBL 921..1027 CDD:429512 39/106 (37%)

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