DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snm1 and INTS9

DIOPT Version :10

Sequence 1:NP_649548.1 Gene:Snm1 / 40669 FlyBaseID:FBgn0037338 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_001349967.1 Gene:INTS9 / 55756 HGNCID:25592 Length:676 Species:Homo sapiens


Alignment Length:680 Identity:126/680 - (18%)
Similarity:214/680 - (31%) Gaps:241/680 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 TTSSAFTGKLDAKPSEKRVQPSRRAKGKENASLSEVHVIDLCSEDEQTIKRKPSAIASPCEKSSD 192
            |..:.|||.:.|  :|..||..|.                |..|....|:|.|.|.::...|:.|
Human   114 TEHTGFTGTVYA--TEPTVQIGRL----------------LMEELVNFIERVPKAQSASLWKNKD 160

  Fly   193 VQATKFRTPETSMPEAKLSNSSL-DLVEISPGPNKSPTNNFYRSSPAAITKESPLGKNSKKGTVR 256
            :|              :|..|.| |.||:|.          :|.........|.|.|....|..:
Human   161 IQ--------------RLLPSPLKDAVEVST----------WRRCYTMQEVNSALSKIQLVGYSQ 201

  Fly   257 KQRKPKPCPPYKVVEGTSFCVDGFQFGEIEGVTHYFLTHFHADHYI-GLTKKFCHPLYVSPISAR 320
            |      ...:..|:.|... .|:..|....:..   :|:....|: |.:....||   .|:...
Human   202 K------IELFGAVQVTPLS-SGYALGSSNWIIQ---SHYEKVSYVSGSSLLTTHP---QPMDQA 253

  Fly   321 LVRTFIKLDETHIHEIDVDQTLDVDGV-----QVTALEANHCPGALMFFFKLSSG------ECIL 374
            .::....|..|.:.:|   .|.:.||:     ...||...:....|:..:  .||      ||:.
Human   254 SLKNSDVLVLTGLTQI---PTANPDGMVGEFCSNLALTVRNGGNVLVPCY--PSGVIYDLLECLY 313

  Fly   375 HTGDFRASADMESLPIFWNHSNIDLLYLDTTYMNKNYDF--------CHQSESVDRAVDLVRAFL 431
            ...|   ||.:.|:|          ||..:...|.:.:|        ||..:|        :.:|
Human   314 QYID---SAGLSSVP----------LYFISPVANSSLEFSQIFAEWLCHNKQS--------KVYL 357

  Fly   432 -----------EKNAAKRILIVCGSY----------VIGKEKIWLALAKEFTMRVWTESNRST-- 473
                       :.|..|....:.|.:          ..|...:.......| |.:|.:|:.:|  
Human   358 PEPPFPHAELIQTNKLKHYPSIHGDFSNDFRQPCVVFTGHPSLRFGDVVHF-MELWGKSSLNTVI 421

  Fly   474 ------------------AVRC--------LNWPDLDSVLTEDRSGANLHVIAMGKISYPSLVDY 512
                              |::|        ||:..:..:|.|.:.   |||:...:.:.|.... 
Human   422 FTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQP---LHVVCPEQYTQPPPAQ- 482

  Fly   513 FTEFEDQYDMLLGIRPSGWEKNSKPSYGKRISTIGIEYSEHSSYKELERFVRFLKPKRVISTVPV 577
                ..:.|:::..:|...      || :|...:.:.:...  |:::|     :.|:...|.||:
Human   483 ----SHRMDLMIDCQPPAM------SY-RRAEVLALPFKRR--YEKIE-----IMPELADSLVPM 529

  Fly   578 GRDLYVTGEVPIRWYKYEGRASMLRTGFQPSISTFLATPKRAFAKFSADTEMFLSPVDENA--SK 640
                    |:                  :|.||  |||.....  .:.|.:..|.|....|  :.
Human   530 --------EI------------------KPGIS--LATVSAVL--HTKDNKHLLQPPPRPAQPTS 564

  Fly   641 GSEDKKDDDRESVVPTNHVTIISDTPEECFQTDSKIPVKNEPLAPDTSPNSEIVAQLNAMES--E 703
            |.:.|:..|              |.|      |.|:   .:||...:.|..:.|..|..:..  .
Human   565 GKKRKRVSD--------------DVP------DCKV---LKPLLSGSIPVEQFVQTLEKISQMCS 606

  Fly   704 IPYVEI----------DIKNETIAPDAVLI 723
            :|...:          |||.|..|...:::
Human   607 LPSPPLSFLLEQHGFSDIKVEDTAKGHIVL 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snm1NP_649548.1 SNM1A-1C-like_MBL-fold 252..408 CDD:293831 32/167 (19%)
DRMBL 481..578 CDD:429512 17/96 (18%)
INTS9NP_001349967.1 Int9-like_MBL-fold 1..265 CDD:293852 42/205 (20%)
Beta-Casp 307..425 CDD:214983 24/139 (17%)

Return to query results.
Submit another query.