DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snm1 and ints-9

DIOPT Version :10

Sequence 1:NP_649548.1 Gene:Snm1 / 40669 FlyBaseID:FBgn0037338 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_504953.1 Gene:ints-9 / 179142 WormBaseID:WBGene00017608 Length:646 Species:Caenorhabditis elegans


Alignment Length:646 Identity:126/646 - (19%)
Similarity:210/646 - (32%) Gaps:204/646 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 PSAIASPCEKSSDVQATKFRTPETSMPEAKLSNSSLDLVEISPGPNKSPTNNFYRSSPAAI---- 240
            |....||..|::.: |.||:.|.              |.|:.        |..|..||..|    
 Worm    40 PHVYQSPRIKNAPI-AKKFQIPY--------------LKELG--------NRVYVESPPEIFHVS 81

  Fly   241 -------TKESPLGKNSKKGTVRKQRKPKPCPPYKVVEGTSFCVDG-------------FQFGEI 285
                   |.::.|..|                 |:...|..|..:|             :|:|::
 Worm    82 TDMLKMDTIDAILVSN-----------------YESFVGLPFYTEGSGFSGKIYVTEIAYQYGKL 129

  Fly   286 --EGVTHYFLTHFHA---------DHYIGLTKKFCHPLYVSPISARLVRTFIKLDETHIHE---- 335
              |.:.. |::....         :.:.|   ||.:|.:.:|:..|...|     .|.:|.    
 Worm   130 LMEEMLE-FISRIEVLPSDKKWKREEFCG---KFPNPPFQNPVEWRPYYT-----TTDMHSCLAK 185

  Fly   336 ---IDVDQTLDVDGVQVTALEANHCPGALMFFFKLSSGECILHTGDFRASAD---MESLPI-FWN 393
               :..:||:|:..::||.:.:.|..|:..:..|..:.:....:....::.|   ||:.|: ..:
 Worm   186 VITLSFNQTIDLFRIKVTPVVSGHTYGSAYWTIKTENEQFAYLSASNPSATDVKLMETAPLRAVD 250

  Fly   394 HSNIDLL--YLDTTYMNKNY-------DFCHQSESVDRAVDLVRAFLEKNAAKRILIVCGSYVIG 449
            |..:..|  .:|||.....|       |...:..||...:..|....|...|...:|...:.:..
 Worm   251 HILVTSLSRLVDTTAKEMGYSLIKTITDVLKKHGSVLLPICPVGPIFEMIEAVSDIITTTNGIPL 315

  Fly   450 KEKIWL-------ALAKEFTMRVWTESNRSTAVRCLNWPDLDSVLTEDRSGANLHVIAMGKIS-Y 506
            ...|:.       |:|.......|...:|..||..   |:      |..|.:||  |..|::. |
 Worm   316 DTPIYFISPVAKSAIAMASISAEWMSESRQNAVYL---PE------EPYSHSNL--IKSGRVKIY 369

  Fly   507 PSLVDYFT-EFE---------------DQYDM--LLGIRPSGWEKNS--------------KPSY 539
            .||...|: ||:               |...|  :||..|    ||:              :|..
 Worm   370 DSLYGSFSKEFKTPCVIFASHASLRIGDAAHMVEVLGSDP----KNAVIVTDPDLPCEDVREPFR 430

  Fly   540 GKRISTIGIEYSEHSSYKELERFVRFLKPKRVISTVPVGRDLYVTGEVPIRWYK-----YE---- 595
            ...|..|.|.......:..|||.:...|||.|:.:....|.:....::.|.:.|     |:    
 Worm   431 NLPIKFINIPMDFRMDFASLERLLADAKPKYVLCSSSYTRPMIRRPDMQINYEKVWPIEYDECVQ 495

  Fly   596 ------GRASMLRTGFQPSI---STFLATPKRAFA------KFSADTEMF-LSPVDENAS----- 639
                  .:..::.....|.:   ..|...|.:..|      ..||..:.| |.|.....:     
 Worm   496 LSKLSRNKQKLVTVAVHPEVVKNLKFKQHPSKKLAVASIACHLSAYNDDFKLVPAKVKIARRKYG 560

  Fly   640 --------KGSEDKKDDDRESVVPTNHVTIISDTPEECFQTDSKIPVKNEPLAPDTSPNSE 692
                    |...||..|.:|...|       .:|..|..:.::||.|||:......|.|::
 Worm   561 RITLAKVLKALRDKNWDAKEVEKP-------DETVLEIDELEAKITVKNDGTGTKISSNNQ 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snm1NP_649548.1 SNM1A-1C-like_MBL-fold 252..408 CDD:293831 34/192 (18%)
DRMBL 481..578 CDD:429512 31/129 (24%)
ints-9NP_504953.1 metallo-hydrolase-like_MBL-fold 1..256 CDD:451500 48/264 (18%)
Beta-Casp 298..416 CDD:214983 30/132 (23%)

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