DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snm1 and LOC1271630

DIOPT Version :10

Sequence 1:NP_649548.1 Gene:Snm1 / 40669 FlyBaseID:FBgn0037338 Length:763 Species:Drosophila melanogaster
Sequence 2:XP_310480.2 Gene:LOC1271630 / 1271630 VectorBaseID:AGAMI1_006606 Length:406 Species:Anopheles gambiae


Alignment Length:437 Identity:106/437 - (24%)
Similarity:183/437 - (41%) Gaps:94/437 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 PYKVVEGTSFCVDGFQFGEIEGVTHYFLTHFHADHYIGL--TKKFCHPLYVSPISARLVRTFIKL 328
            |..|.|.....:|.|.....:..|.:||:|.|.||..||  ......||||||.:|.:|.  ::.
Mosquito     5 PGTVPELPGIGIDRFDQPVRDRATLFFLSHCHVDHMQGLPDAAPLPGPLYVSPHTAVIVG--LRH 67

  Fly   329 DETHIHEIDVDQTLDVD---------GVQVTALEANHCPGALMFFFKLSSGECILHTGDFR-ASA 383
            .:..:..:.|.:.|::.         .:.|..:.|.||||::||:|:..:.. :|:||||| :||
Mosquito    68 PQHTLVPVPVREQLNLTVRPPAGPAYELCVRTVPAEHCPGSVMFYFETKTVR-LLYTGDFRLSSA 131

  Fly   384 DMESLPIFWNHSNIDLLYLDTTYMNKNYD-FCHQSESVDRAVDLVRAFLEKNAAKRILIVC---G 444
            .:.::..:.....|  :|||:|::::.|. |..:..|:||.|:|...:|..:  :|.::..   .
Mosquito   132 SLTAIARYRVRPTI--VYLDSTFLDRRYAYFPPRQASMDRIVELCSRWLAHD--RRNVVALWPPA 192

  Fly   445 SYVIGKEKIWLALAKEFTMRVWT-----ESNRSTAVRCLNWPDLDSVLTEDRSGANLHVIAMGKI 504
            ||  |.|:::..||.....|:..     |.....||       ||.|.|:|.:||.:|......:
Mosquito   193 SY--GSEELFCQLADRLHQRIHVYAAQREPYNHFAV-------LDHVFTDDAAGARIHACRGKTL 248

  Fly   505 SYPSLVDYFTEFEDQYDMLLGIRPSG------------WEKNSKPSYGKRISTIGIEYSEHSSYK 557
            .:..........|...|.:|.|||:.            |::.|...:       .:.||.|:|..
Mosquito   249 EHERACRAAKPEEKHPDFVLTIRPTARRWCNLRPGEPFWQQGSGNLW-------YVCYSSHASST 306

  Fly   558 ELERFVRFLKP-------------------KRVISTV--PVGRDLYVTGEVPIRWY-----KYEG 596
            ||..|:|.|:|                   :.::.::  |.|.:|...||.|.|.:     .::.
Mosquito   307 ELVEFLRSLQPDVRDIRFSVVADELDRVGKETLLRSLLEPAGNELVPPGEAPQRLHCLPLGAFKA 371

  Fly   597 RASMLRTGFQPSISTFLATPKRAFAKFSADTEMFLSPVDENASKGSE 643
            :|.:.:...:.|.|.            :.|.|:...|:......||:
Mosquito   372 KAKLKQAACKESDSE------------TEDDELHRRPMKMVRRTGSD 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snm1NP_649548.1 SNM1A-1C-like_MBL-fold 252..408 CDD:293831 46/153 (30%)
DRMBL 481..578 CDD:429512 27/129 (21%)
LOC1271630XP_310480.2 metallo-hydrolase-like_MBL-fold 1..154 CDD:451500 46/153 (30%)
DRMBL 227..318 CDD:429512 25/97 (26%)

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