DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Pcmt and pcmt1

DIOPT Version :9

Sequence 1:	NP_536756.1	Gene:	Pcmt / 40668	FlyBaseID:	FBgn0086768	Length:	226	Species:	Drosophila melanogaster
Sequence 2:	NP_001025616.1	Gene:	pcmt1 / 595004	XenbaseID:	XB-GENE-959017	Length:	228	Species:	Xenopus tropicalis

Alignment Length:	223	Identity:	129/223 - (57%)
Similarity:	163/223 - (73%)	Gaps:	5/223 - (2%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MAWRSVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIGGGVTISAPHMH 65
            |||:|.||::.:|:..|:.:|:|.||.|.:.|.||||:||:..|||||:||.||...||||||||
Frog     1 MAWKSGGASHSELVNNLRKNGIIKSDRVFEVMLETDRRHYAKCNPYMDSPQSIGYQATISAPHMH 65

  Fly    66 AFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNT 130
            |:|||.|.|.|..||:.||||||||.|||||.|.:..||     ::|||:|..|||..|..|:..
Frog    66 AYALELLHDQLHEGAKALDVGSGSGILTACFSRMVGPKG-----KVVGIDHIKELVDDSINNVKK 125

  Fly   131 DDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVGPDGGSQ 195
            ||.::|.||::.::.||||.|||..|||:|||||||||..|..||:||..|||||:||||.||:|
Frog   126 DDTTLLSSGRVKLLVGDGRMGYPEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQ 190

  Fly   196 YMQQYDKDANGKVEMTRLMGVMYVPLTD 223
            .::||||..:|.|:|..||||:||||||
Frog   191 MLEQYDKLDDGSVKMKPLMGVIYVPLTD 218

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Pcmt	NP_536756.1	PCMT	8..221	CDD:250389	120/212 (57%)
Pcmt	NP_536756.1	AdoMet_MTases	13..223	CDD:302624	121/209 (58%)
pcmt1	NP_001025616.1	PCMT	8..216	CDD:250389	120/212 (57%)
pcmt1	NP_001025616.1	AdoMet_MTases	13..220	CDD:302624	123/211 (58%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	245	1.000	Domainoid score	I2137
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H55895
Inparanoid	1	1.050	257	1.000	Inparanoid score	I3063
OMA	1	1.010	-	-		QHG53644
OrthoDB	1	1.010	-	-		D1138104at2759
OrthoFinder	1	1.000	-	-		FOG0002960
OrthoInspector	1	1.000	-	-		otm47677
Panther	1	1.100	-	-	O	PTHR11579
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X2315
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	11	11.080