DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pcmt and pcmtl

DIOPT Version :9

Sequence 1:NP_536756.1 Gene:Pcmt / 40668 FlyBaseID:FBgn0086768 Length:226 Species:Drosophila melanogaster
Sequence 2:XP_005158823.1 Gene:pcmtl / 393741 ZFINID:ZDB-GENE-040426-1738 Length:257 Species:Danio rerio


Alignment Length:223 Identity:123/223 - (55%)
Similarity:154/223 - (69%) Gaps:5/223 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAWRSVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIGGGVTISAPHMH 65
            |||.|.|..:.:||.:|:|||||.:|.|..||..|||..||..:||.|:||.||...||||||||
Zfish    22 MAWMSSGKTHVELITRLRDHGVIHNDRVFNAMLATDRGIYSRDHPYADSPQSIGYKATISAPHMH 86

  Fly    66 AFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNT 130
            |.|||.|.|.|..||..||||||||||||||.|.:...|     ::|||:|..:||:.|..|:..
Zfish    87 AHALEVLSDKLTEGASALDVGSGSGYLTACFARMVGPSG-----KVVGIDHIDQLVQSSVKNVQA 146

  Fly   131 DDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVGPDGGSQ 195
            ||..:|.:|::.:|.||||.|:|..|||:|||||||||..|..|:.||..||||::||||:||||
Zfish   147 DDPELLATGRIKLVVGDGRFGFPDEAPYDAIHVGAAAPTLPKALLEQLKPGGRLVLPVGPEGGSQ 211

  Fly   196 YMQQYDKDANGKVEMTRLMGVMYVPLTD 223
            .::|||:.::|......||||:||||||
Zfish   212 VLEQYDRQSDGTFLRKPLMGVVYVPLTD 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcmtNP_536756.1 PCMT 8..221 CDD:250389 114/212 (54%)
AdoMet_MTases 13..223 CDD:302624 116/209 (56%)
pcmtlXP_005158823.1 PCMT 30..237 CDD:250389 114/211 (54%)
AdoMet_MTases 34..239 CDD:302624 116/209 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579055
Domainoid 1 1.000 235 1.000 Domainoid score I2297
eggNOG 1 0.900 - - E1_COG2518
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 248 1.000 Inparanoid score I3237
OMA 1 1.010 - - QHG53644
OrthoDB 1 1.010 - - D1138104at2759
OrthoFinder 1 1.000 - - FOG0002960
OrthoInspector 1 1.000 - - otm26086
orthoMCL 1 0.900 - - OOG6_100731
Panther 1 1.100 - - LDO PTHR11579
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2315
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.770

Return to query results.
Submit another query.