DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcmt and pcmtd1

DIOPT Version :10

Sequence 1:NP_536756.1 Gene:Pcmt / 40668 FlyBaseID:FBgn0086768 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001025238.3 Gene:pcmtd1 / 327176 ZFINID:ZDB-GENE-030131-5387 Length:359 Species:Danio rerio


Alignment Length:234 Identity:60/234 - (25%)
Similarity:98/234 - (41%) Gaps:37/234 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPR----NPYMDAPQPIGGGVTISAPHMH 65
            |.|.:|:|||..||:...|.::.|.||.:..||..|...    |.|.|.... .|.:.:|||.::
Zfish     6 SAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWK-HGNIHLSAPCIY 69

  Fly    66 AFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANL-- 128
            :..:|.|:  |:.|...|::|||:|||:......|...||:.     |:|...::|..:...|  
Zfish    70 SEVMEALK--LQQGLSFLNLGSGTGYLSTMVGLIIGPFGVNH-----GVELHKDVVEYANERLDD 127

  Fly   129 ---NTDDRSMLD-------SGQLLIVEGDGRKGYPPNAPYNAIHVGAAA-PDTPTELINQLASGG 182
               |:|.....:       .|..|.:..|..:       |:.|:.||.. .|....:...|..||
Zfish   128 FIKNSDSFDRFEFCEPHFVVGNCLEISSDSHQ-------YDRIYCGAGVQKDHENYMKILLKVGG 185

  Fly   183 RLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPL 221
            .|::|:     ...:.|..:......|...::.|.:.||
Zfish   186 ILVMPI-----EDQLTQIIRTGQSSWESKNILAVSFAPL 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcmtNP_536756.1 PCMT 8..221 CDD:395902 56/229 (24%)
pcmtd1NP_001025238.3 PCMT 11..219 CDD:395902 56/227 (25%)
SOCS <335..356 CDD:470605
Blue background indicates that the domain is not in the aligned region.

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