DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pcmt and pcmt

DIOPT Version :9

Sequence 1:NP_536756.1 Gene:Pcmt / 40668 FlyBaseID:FBgn0086768 Length:226 Species:Drosophila melanogaster
Sequence 2:XP_005160364.1 Gene:pcmt / 30751 ZFINID:ZDB-GENE-990415-134 Length:265 Species:Danio rerio


Alignment Length:223 Identity:122/223 - (54%)
Similarity:159/223 - (71%) Gaps:5/223 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAWRSVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIGGGVTISAPHMH 65
            |||:|.||::.:|:..|:.:|:|.||.|.:.|..|||.|:|..|||||:||.||...||||||||
Zfish    39 MAWKSGGASHAELVNNLRKNGIIKSDRVYEVMLATDRSHFSRCNPYMDSPQSIGYQATISAPHMH 103

  Fly    66 AFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNT 130
            |:|||.|.|||..||:.||||||||.|:.||.|.:...|     :::||:|..|||..|.||:..
Zfish   104 AYALELLHDHLYEGAKALDVGSGSGILSVCFSRMVGPTG-----KVIGIDHIKELVEDSIANVKK 163

  Fly   131 DDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVGPDGGSQ 195
            ||.|::.||::.::.||||.|:...|||:|||||||||..|..|::||..|||||:||||.||:|
Zfish   164 DDPSLITSGRIKLIVGDGRMGFTEEAPYDAIHVGAAAPTVPQALLDQLKPGGRLILPVGPAGGNQ 228

  Fly   196 YMQQYDKDANGKVEMTRLMGVMYVPLTD 223
            .::||||..:|..:|..||||:||||||
Zfish   229 MLEQYDKLEDGSTKMKPLMGVIYVPLTD 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcmtNP_536756.1 PCMT 8..221 CDD:250389 113/212 (53%)
AdoMet_MTases 13..223 CDD:302624 114/209 (55%)
pcmtXP_005160364.1 PCMT 46..254 CDD:250389 113/212 (53%)
AdoMet_MTases 49..256 CDD:302624 114/211 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579054
Domainoid 1 1.000 235 1.000 Domainoid score I2297
eggNOG 1 0.900 - - E1_COG2518
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55895
Inparanoid 1 1.050 248 1.000 Inparanoid score I3237
OMA 1 1.010 - - QHG53644
OrthoDB 1 1.010 - - D1138104at2759
OrthoFinder 1 1.000 - - FOG0002960
OrthoInspector 1 1.000 - - otm26086
orthoMCL 1 0.900 - - OOG6_100731
Panther 1 1.100 - - O PTHR11579
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R925
SonicParanoid 1 1.000 - - X2315
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

Return to query results.
Submit another query.