DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcmt and pcm2

DIOPT Version :9

Sequence 1:NP_536756.1 Gene:Pcmt / 40668 FlyBaseID:FBgn0086768 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_595011.1 Gene:pcm2 / 2543383 PomBaseID:SPAC869.08 Length:230 Species:Schizosaccharomyces pombe


Alignment Length:229 Identity:96/229 - (41%)
Similarity:131/229 - (57%) Gaps:13/229 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAWRSVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIGGGVTISAPHMH 65
            |.|....::|..|::.|.:...:.:....:||..|.|..|.|.:||||:||.||.||||||||||
pombe     1 MFWSFNLSSNAALVQHLVESKFLTNQRAIKAMNATSRSFYCPLSPYMDSPQSIGYGVTISAPHMH 65

  Fly    66 AFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANL-- 128
            |.||:.|...|:||...||:|||||||.|...|.:...|.     :.||||..:||..||.||  
pombe    66 ATALQELEPVLQPGCSALDIGSGSGYLVAAMARMVAPNGT-----VKGIEHIPQLVETSKKNLLK 125

  Fly   129 --NTDD--RSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVG 189
              |.|:  ..|....:|.|..||||.|...:..::||||||:|.:.|.:|::||.|.|::::|:|
pombe   126 DINHDEVLMEMYKEKRLQINVGDGRMGTSEDEKFDAIHVGASASELPQKLVDQLKSPGKILIPIG 190

  Fly   190 PDGGSQYMQQYDKDANGKVEMTRLMGVMYVPLTD 223
            .  .||.:...:|:..||:....|..|.||||||
pombe   191 T--YSQNIYLIEKNEQGKISKRTLFPVRYVPLTD 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcmtNP_536756.1 PCMT 8..221 CDD:250389 90/218 (41%)
AdoMet_MTases 13..223 CDD:302624 91/215 (42%)
pcm2NP_595011.1 PCMT 8..220 CDD:250389 90/218 (41%)
AdoMet_MTases 11..222 CDD:302624 91/217 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 162 1.000 Domainoid score I968
eggNOG 1 0.900 - - E1_COG2518
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55895
Inparanoid 1 1.050 164 1.000 Inparanoid score I1223
OMA 1 1.010 - - QHG53644
OrthoFinder 1 1.000 - - FOG0002960
OrthoInspector 1 1.000 - - oto100603
orthoMCL 1 0.900 - - OOG6_100731
Panther 1 1.100 - - LDO PTHR11579
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R925
SonicParanoid 1 1.000 - - X2315
TreeFam 1 0.960 - -
1413.860

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