DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcmt and Pcmt1

DIOPT Version :10

Sequence 1:NP_536756.1 Gene:Pcmt / 40668 FlyBaseID:FBgn0086768 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001394144.1 Gene:Pcmt1 / 18537 MGIID:97502 Length:230 Species:Mus musculus


Alignment Length:223 Identity:126/223 - (56%)
Similarity:158/223 - (70%) Gaps:5/223 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAWRSVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIGGGVTISAPHMH 65
            |||:|.||::.:||..|:.:|:|.:|.|.:.|..|||.||:..|||||:||.||...||||||||
Mouse     1 MAWKSGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKSNPYMDSPQSIGFQATISAPHMH 65

  Fly    66 AFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNT 130
            |:|||.|.|.|..||:.||||||||.|||||.|.:...|     :::||:|..|||..|..|:..
Mouse    66 AYALELLFDQLHEGAKALDVGSGSGILTACFARMVGNSG-----KVIGIDHIKELVDDSITNVKK 125

  Fly   131 DDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVGPDGGSQ 195
            ||..:|.||::.:|.||||.||...|||:|||||||||..|..||:||..|||||:||||.||:|
Mouse   126 DDPMLLSSGRVRLVVGDGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQ 190

  Fly   196 YMQQYDKDANGKVEMTRLMGVMYVPLTD 223
            .::||||..:|.|:|..||||:||||||
Mouse   191 MLEQYDKLQDGSVKMKPLMGVIYVPLTD 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcmtNP_536756.1 PCMT 8..221 CDD:395902 117/212 (55%)
Pcmt1NP_001394144.1 PCMT 8..216 CDD:395902 117/212 (55%)

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