DRSC/TRiP Functional Genomics Resources

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Protein Alignment mia and TAF6

DIOPT Version :9

Sequence 1:NP_001138010.1 Gene:mia / 40667 FlyBaseID:FBgn0014342 Length:589 Species:Drosophila melanogaster
Sequence 2:NP_011403.1 Gene:TAF6 / 852766 SGDID:S000003080 Length:516 Species:Saccharomyces cerevisiae


Alignment Length:500 Identity:102/500 - (20%)
Similarity:198/500 - (39%) Gaps:130/500 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 SPRSLSAIFFHSTGL-HLDDGVAQWLSINVKEDITNLLNEAGKYMRRIRDRRLQLSHIQHAVRM- 94
            ||:........|.|| :::|.|.:.|:::|:..|..::.:|.|:.|..:...|....:..|:|: 
Yeast    12 SPQDTVKDVAESLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKALRVL 76

  Fly    95 -----------------------------------HDDLCYDIFFRLVHCDDCKMPPSQKVLKT- 123
                                               .:::.:|   ||:: :.....|......| 
Yeast    77 NVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFD---RLIN-EPLPQVPRLPTFTTH 137

  Fly   124 ------VREAVTAEKK-DELLVSYPESVQESVPEPVPETSLEPP---------------PMHTGW 166
                  |:.|:..... :::.||.|..::.::...:.:.||:.|               ..|...
Yeast   138 WLAVEGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALNDNSLQTPVTSTTASASVTDTGASQHLSN 202

  Fly   167 LKVEQ-VLLKPSKRYPLSMEQQNFFELVTEACVGDLES------RRVLALKAISTDPSLEELLPR 224
            :|..| ..:||..::.||.|.|.:|..|........::      .:..||.::.||..|.:|:|.
Yeast   203 VKPGQNTEVKPLVKHVLSKELQIYFNKVISTLTAKSQADEAAQHMKQAALTSLRTDSGLHQLVPY 267

  Fly   225 LTKFIADAVAINVAQQNLPLLLYLMRMVRALLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPNS 289
            ..:|||:.:..|::  :|.||..::.|:.:||.|....|..|:|.|:|::|:.||||::..||..
Yeast   268 FIQFIAEQITQNLS--DLQLLTTILEMIYSLLSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKD 330

  Fly   290 EDHW----------ALREYSGNIMAHIVRQFDAADNGILPRVIGVYNKALLKK--PLTTVFGAVI 342
            :...          |||:::.:::.:::::|..|...:.|||    .:.|||.  .:..|||...
Yeast   331 DSPQEIHEFLERTNALRDFAASLLDYVLKKFPQAYKSLKPRV----TRTLLKTFLDINRVFGTYY 391

  Fly   343 G----------------LGKMGNHAVRACILPQLKYLSEHIDSHMAASNDSPSSSVDRQAVKYIR 391
            |                ||.:.|.|  ..:..:.....::|:.|:   ||..:.:    ..|:.:
Yeast   392 GCLKGVSVLEGESIRFFLGNLNNWA--RLVFNESGITLDNIEEHL---NDDSNPT----RTKFTK 447

  Fly   392 HRLMKMCSPVLMGI----HQPPDL------------PEEFMERYG 420
            .....:...|:..:    ...|||            .|:.:||.|
Yeast   448 EETQILVDTVISALLVLKKDLPDLYEGKGEKVTDEDKEKLLERCG 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
miaNP_001138010.1 TAF6 33..352 CDD:173968 87/413 (21%)
TAF6 40..422 CDD:227426 99/491 (20%)
TAF6NP_011403.1 TAF6 6..513 CDD:227426 101/499 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345459
Domainoid 1 1.000 45 1.000 Domainoid score I3086
eggNOG 1 0.900 - - E1_COG5095
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003125
OrthoInspector 1 1.000 - - otm46532
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.800

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