Protein Alignment mia and TAFII59

DIOPT Version :10

• Sequence 1: NP_649547.3
• Gene: mia / 40667
• FlyBaseID: FBgn0014342
• Length: 589
• Species: Drosophila melanogaster
• Sequence 2: NP_171987.1
• Gene: TAFII59 / 839370
• AraportID: AT1G04950
• Length: 549
• Species: Arabidopsis thaliana
• Alignment Length: 561
• Identity: 140/561 - (24%)
• Similarity: 243/561 - (43%)
• Gaps: 105/561 - (18%)

  Fly    30 SLSPRSLSAIFFHSTGL-HLDDGVAQWLSINVKEDITNLLNEAGKYMRRIRDRRLQLSHIQHAVR 93
            |:.|:....:...|.|: :|....|..|:.:|:..:..::.||.|.||..:...|..|.:..|:.
plant     2 SIVPKETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASDVDGALN 66

  Fly    94 M----------------------HDDLCYDIFFRLVHCDDCKMPPSQKVLKTVREA--VTAEKKD 134
            :                      |.||.|        .||.::.     .|.|.||  ..|....
plant    67 LRNVEPIYGFASGGPFRFRKAIGHRDLFY--------TDDREVD-----FKDVIEAPLPKAPLDT 118

  Fly   135 ELLVSY--PESVQESVPEPVPETSLEPP-----------PMHTGWLKVEQVLLKPSKRYPLSMEQ 186
            |::..:  .|.||.::||..|...:..|           |:....|.|:.|         ||.|.
plant   119 EIVCHWLAIEGVQPAIPENAPLEVIRAPAETKIHEQKDGPLIDVRLPVKHV---------LSREL 174

  Fly   187 QNFFELVTEACVGDLESRRVL---ALKAISTDPSLEELLPRLTKFIADAVAINVAQQNLPLLLYL 248
            |.:|:.:.|..:.  :|...|   ||.::::|..|..|:|..|.||||.|:..:  .:..||..|
plant   175 QLYFQKIAELAMS--KSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNGL--NDFRLLFNL 235

  Fly   249 MRMVRALLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPNSEDHWALREYSGNIMAHIVRQFDAA 313
            |.:||:||.|....:..|||.|:|:|::||::::: .:..:::||.||:::.|:::.|.:::...
plant   236 MHIVRSLLQNPHIHIEPYLHQLMPSVVTCLVSRKL-GNRFADNHWELRDFAANLVSLICKRYGTV 299

  Fly   314 DNGILPRVIGVYNKALL--KKPLTTVFGAVIGLGKMGNHAVRACILPQLK-YLSEHIDSHMAASN 375
            ...:..|:......|||  ||.||..:||:.||..:|:..||..||..|: ||| .::..:.|..
plant   300 YITLQSRLTRTLVNALLDPKKALTQHYGAIQGLAALGHTVVRLLILSNLEPYLS-LLEPELNAEK 363

  Fly   376 DSPSSSVDR---------QAVKYIRHRLMKMCSPVLMGIHQPPDLPEEFMERYGSLGTLMSDGVT 431
            ......:..         :|.....|..:|:..|:       |.....|:.:....|.::|..
plant   364 QKNQMKIYEAWRVYGALLRAAGLCIHGRLKIFPPL-------PSPSPSFLHKGKGKGKIISTD-- 419

  Fly   432 VMRTKKQAVAAAKAEAELKLKNMAT----EHLNSRGK-GSRSVGSNDLVSGTQLPKNGIRPTS-- 489
               ..|:.::...:|.:...|.:.|    :.::|:.: ||..:..::.|.....|:|.::|:|
plant   420 ---PHKRKLSVDSSENQSPQKRLITMDGPDGVHSQDQSGSAPMQVDNPVENDNPPQNSVQPSSSE 481

  Fly   490 QAPKSVYSISVNGQTVKISTPNLCNTML----QHQKKDLFS 526
            ||..:..|.|.||: ||.|..:...||.    |..|.||.|
plant   482 QASDANESESRNGK-VKESGRSRAITMKAILDQIWKDDLDS 521

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mia	NP_649547.3	HFD_SF	<47..94	CDD:480273	12/46 (26%)
		TAF6C	181..397	CDD:381749	67/230 (29%)
		HEAT repeat	184..215	CDD:381749	8/33 (24%)
		HEAT repeat	222..257	CDD:381749	14/34 (41%)
		HEAT repeat	267..310	CDD:381749	13/42 (31%)
		HEAT repeat	317..347	CDD:381749	12/31 (39%)
		HEAT repeat	349..396	CDD:381749	11/56 (20%)
TAFII59	NP_171987.1	TAF6	1..383	CDD:227426	104/408 (25%)