DRSC/TRiP Functional Genomics Resources

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Protein Alignment mia and eri-3

DIOPT Version :9

Sequence 1:NP_001138010.1 Gene:mia / 40667 FlyBaseID:FBgn0014342 Length:589 Species:Drosophila melanogaster
Sequence 2:NP_493918.2 Gene:eri-3 / 173497 WormBaseID:WBGene00021103 Length:578 Species:Caenorhabditis elegans


Alignment Length:310 Identity:61/310 - (19%)
Similarity:102/310 - (32%) Gaps:100/310 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KSFRRHSLSPRSL---SAIFFHSTGLHLDDGVAQWLSINVKEDITNLLNE----AGKYMRRIRDR 81
            |..:.|.:....|   .:|:|.||..|  ..:.:.:||.   .:.|:|.:    ...|.....|.
 Worm   230 KIMKNHFMEANFLQNSESIYFDSTSCH--SNILEKVSIG---SLINVLADPTFATSSYKWYGYDV 289

  Fly    82 RLQLSHIQHAVRMHDDLCYDIFFRLVH---CDDCKMPPSQKVLKTVREAVTAEKKD-ELLVSYPE 142
            .|..:::.||.....       |.|.:   ..:||     |:.|:..||.|..|.| ..:...||
 Worm   290 TLCNNYLAHASTQRS-------FVLENNEILQNCK-----KLEKSPEEAETTTKNDLRFVPPQPE 342

  Fly   143 ------------------SVQ------------ESVPEPVPET------------SLEPPPMHTG 165
                              |.|            ..:||...::            .::...:...
 Worm   343 KGEVKKKKMTNCLKFNSKSAQFKLRHLILDRCFSELPEREAKSIINSYFIDRLAEGIKIEKIDKN 407

  Fly   166 WLKVEQVLLKPSKRYPLSMEQ--QNFFELVTEACVGDLESRRVLAL----KAISTDPSLEELLPR 224
            |....::|.|..|:|..|:::  ||..|              ...|    ||..| |.:.|..|:
 Worm   408 WRTFGEILPKTPKKYSESLKKSIQNVLE--------------PFGLNKPEKAAET-PKIVEYFPK 457

  Fly   225 LTKFIADAVAINVAQQNLPLLLYLMRMVRALLGNQRFSLLQYL--HLLLP 272
            ..|...:.|       ..|.:..:..:..||:..:.|:|.|.:  |.:||
 Worm   458 NPKKRVEIV-------EKPTVDEIRELFGALMDAEGFALNQRVKPHFVLP 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
miaNP_001138010.1 TAF6 33..352 CDD:173968 59/301 (20%)
TAF6 40..422 CDD:227426 57/291 (20%)
eri-3NP_493918.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5095
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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