DRSC/TRiP Functional Genomics Resources

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Protein Alignment mia and TAF6L

DIOPT Version :9

Sequence 1:NP_001138010.1 Gene:mia / 40667 FlyBaseID:FBgn0014342 Length:589 Species:Drosophila melanogaster
Sequence 2:NP_006464.1 Gene:TAF6L / 10629 HGNCID:17305 Length:622 Species:Homo sapiens


Alignment Length:507 Identity:124/507 - (24%)
Similarity:202/507 - (39%) Gaps:123/507 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DKSFRRHSLSPRSLSAIFFHSTGLHLDDGVAQWLSINVKEDITNLLNEA----GKYMRRIRDRRL 83
            ::..||....||....:...||||.|.|.||..|:    ||:...|.||    .::|:..:.|:|
Human     3 EREERRFVEIPRESVRLMAESTGLELSDEVAALLA----EDVCYRLREATQNSSQFMKHTKRRKL 63

  Fly    84 QLSHIQHAVRMH--DDLC-YDIFFRLVHCDDCKMPPSQKVLKTVREAVTAEKKDELLVSYPE--- 142
            .:.....|:|..  :.:| |.               ||:.| .:|.|    ::.||.  :||   
Human    64 TVEDFNRALRWSSVEAVCGYG---------------SQEAL-PMRPA----REGELY--FPEDRE 106

  Fly   143 ------SVQESVPEPVPETSLEPPPMHTGWLKVEQVLLK----PSKRYPLSMEQQNFFELVTEAC 197
                  ::..::|:...||::.   :|..:|..:..|..    ||....|:.:...::..||.|.
Human   107 VNLVELALATNIPKGCAETAVR---VHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYHQVTRAV 168

  Fly   198 VGDLESRRVLALKAISTDPSLEELLPRLTKFIADAVAINVAQQNLPLLLYLMRMVRALLGNQRFS 262
            :||......:||:.:.|:..:..|||   .|:.....:.....:|..|..|:::.|:|..|....
Human   169 LGDDPQLMKVALQDLQTNSKIGALLP---YFVYVVSGVKSVSHDLEQLHRLLQVARSLFRNPHLC 230

  Fly   263 LLQYLHLLLPAVLSCLLAKQVCASPNS-EDHWALREYSGNIMAHIVRQFDAADNGILPRVIGVYN 326
            |..|:..|:.:||.|:| :.:.||.|. .|||.||:.:..:::||.     ..:|.|  |.|:|.
Human   231 LGPYVRCLVGSVLYCVL-EPLAASINPLNDHWTLRDGAALLLSHIF-----WTHGDL--VSGLYQ 287

  Fly   327 KALLK---------KPLTTVFGAVIGLGKMGNHAVRACILPQLKYLSEHIDSHMAASNDSPSSSV 382
            ..||.         :||...:|||:||..:|..||...:.|   :||.:..:..|..:|   .||
Human   288 HILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLYP---HLSTYWTNLQAVLDD---YSV 346

  Fly   383 DRQAVKYIRHRLMKMCSPVLMGIHQPPDLPEEFMERYGSLGTLMSDGVTVMRTKKQAVAAAKAEA 447
            ....||...|::                        ||::      .|.|.|..|....||:...
Human   347 SNAQVKADGHKV------------------------YGAI------LVAVERLLKMKAQAAEPNR 381

  Fly   448 ------------ELKLKNMATEHLNSRGKGSRSVGSNDLVSGTQLPKNGIRP 487
                        :|...::..:..:|.|....|.|     ||..||..|..|
Human   382 GGPGGRGCRRLDDLPWDSLLFQESSSGGGAEPSFG-----SGLPLPPGGAGP 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
miaNP_001138010.1 TAF6 33..352 CDD:173968 91/348 (26%)
TAF6 40..422 CDD:227426 103/411 (25%)
TAF6LNP_006464.1 TAF 9..73 CDD:281032 20/67 (30%)
TAF6C 153..365 CDD:381749 65/258 (25%)
HEAT repeat 155..186 CDD:381749 7/30 (23%)
HEAT repeat 193..225 CDD:381749 8/34 (24%)
HEAT repeat 235..278 CDD:381749 15/48 (31%)
HEAT repeat 285..317 CDD:381749 10/31 (32%)
HEAT repeat 319..364 CDD:381749 14/80 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 403..430 10/31 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 457..546
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156573
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5095
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D384329at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.750

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