Sequence 1: | NP_730940.1 | Gene: | Nmdar1 / 40665 | FlyBaseID: | FBgn0010399 | Length: | 997 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001030971.1 | Gene: | GLR3.4 / 839268 | AraportID: | AT1G05200 | Length: | 959 | Species: | Arabidopsis thaliana |
Alignment Length: | 942 | Identity: | 212/942 - (22%) |
---|---|---|---|
Similarity: | 381/942 - (40%) | Gaps: | 217/942 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 VLLVAPIDAAQRHTASDN---------------PSTYNIGGVLSNSD-----SEEHFSTTIKHLN 62
Fly 63 FDQQYVPRKVTYYDKTIRM-----DKNPIKTVFNVCD---------KLIENRVYAVVVSHEQTSG 113
Fly 114 DLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPPYYHQADVWLEMLSHFAYTKVII 178
Fly 179 IHSSDTDGR---AILGRFQTTSQTYYDDVDVRATVELIVEFEPKL------ESFTEHLIDMKTAQ 234
Fly 235 SRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE---QALFS-----NNTPDGVLGLQLEHAH 291
Fly 292 SDKGHIR------------------------DSVYVLASAIKEMI---SNETIAEAP---KDCGD 326
Fly 327 ----SAVN-WESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFSYD 386
Fly 387 S-----------------MRAKMRMRINDSEIIWPGKQRRKPEGIMIPTHLRLLTIEEKPFV--- 431
Fly 432 -YVRRMGDDEFRCEPDERPCPLFNNSDATANEFCCRGYCIDLL---IE-LSKRINFTYDLALSPD 491
Fly 492 GQFGHYILRNNTGAMTLRKEWTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGITILE 556
Fly 557 KKPSRSSTLVSFLQPFSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEE----KALN 617
Fly 618 LSSAVWFAWGVLLNSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGI 682
Fly 683 NDARLRNTMENLTCATVKGSSVDMYFRRQVEL--SNMYRTMEANNYATAEQAIQDVKKGKLMAFI 745
Fly 746 WDSSRLE-YEASKDCELVTAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIF 809
Fly 810 HGHVQQNCELFEKTPNTLGLKNMAGVFILVGV 841 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nmdar1 | NP_730940.1 | PBP1_iGluR_NMDA_NR1 | 12..405 | CDD:107374 | 103/489 (21%) |
ANF_receptor | 58..371 | CDD:279440 | 81/378 (21%) | ||
PBP2_iGluR_NMDA_Nr1 | 417..818 | CDD:270437 | 99/415 (24%) | ||
HisJ | 451..>558 | CDD:223904 | 29/110 (26%) | ||
Periplasmic_Binding_Protein_Type_2 | <516..651 | CDD:304360 | 34/138 (25%) | ||
Lig_chan | 575..838 | CDD:278489 | 61/269 (23%) | ||
CaM_bdg_C0 | 854..882 | CDD:287524 | |||
GLR3.4 | NP_001030971.1 | PBP1_GABAb_receptor_plant | 62..450 | CDD:380645 | 89/422 (21%) |
Periplasmic_Binding_Protein_Type_2 | <518..591 | CDD:389745 | 28/88 (32%) | ||
Lig_chan | 615..869 | CDD:365843 | 62/274 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 82 | 0.746 | Domainoid score | I2907 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 169 | 1.000 | Inparanoid score | I1556 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 1 | 1.000 | - | - | mtm1027 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 6.060 |