Protein Alignment Nmdar1 and GLR2.5

DIOPT Version :10

• Sequence 1: NP_730940.1
• Gene: Nmdar1 / 40665
• FlyBaseID: FBgn0010399
• Length: 997
• Species: Drosophila melanogaster
• Sequence 2: NP_001332219.1
• Gene: GLR2.5 / 830991
• AraportID: AT5G11210
• Length: 918
• Species: Arabidopsis thaliana
• Alignment Length: 944
• Identity: 192/944 - (20%)
• Similarity: 356/944 - (37%)
• Gaps: 202/944 - (21%)

  Fly    72 VTYYDKTIRMDKNPIKTVFNVCDKLIENRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGI-S 135
            ||..|.::|.....:...:|..:. .:.|:...|...:||....:.:|:........:.:||. :
plant    47 VTLADLSLRAINMSLSEFYNTHNG-FKTRIVLNVRDSKQTVVGAAASALYLIKKREVVAIIGPGT 110

  Fly   136 SRDAAF------SDKNIHVSFLRTVP-------PYY--------HQADVWLEMLSHFAYTKVIII 179
            |..|.|      ..|...:||..|.|       ||:        .|......::..|.:.:|:.|
plant   111 SMQAPFLINLGNQSKVPIISFSATSPLLDSLRSPYFIRATHDDSSQVQAISAIIESFRWREVVPI 175

  Fly   180 HSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEHLIDMKTAQSRVYLMYAST 244
            :..:..|..||......    :.:::||......:......:...:.|..:.|..:||::::...
plant   176 YVDNEFGEGILPNLVDA----FQEINVRIRYRSAISLHYSDDQIKKELYKLMTMPTRVFIVHMLP 236

  Fly   245 EDAQVIFRDAGEYNMTGEGHVWIVT-----------EQALFSNNTPDGVLGLQLEHAHS-DKGHI 297
            :....:|..|.|.:|..:|:|||||           |.:|.:.:   ||||::...|.| :..|:
plant   237 DLGSRLFSIAKEIDMLSKGYVWIVTNGIADLMSIMGESSLVNMH---GVLGVKTYFAKSKELLHL 298

  Fly   298 R--------------------DSVYVLASAIKE-----MISNETIAEAPKDCGDSAVNWE----- 332
            .                    |:...||.:::|     |..|.|..:..:|  |...:.:
plant   299 EARWQKRFGGEELNNFACWAYDAATALAMSVEEIRHVNMSFNTTKEDTSRD--DIGTDLDELGVA 361

  Fly   333 -SGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHV--------------VGK 382
             ||.:|...|.:.:..|..|:... .||......:.:|||.|..::.|              |.|
plant   362 LSGPKLLDALSTVSFKGVAGRFQL-KNGKLEATTFKIINIEESGERTVGFWKSKVGLVKSLRVDK 425

  Fly   383 FSYDSMRAKMRMRINDSEIIWPGKQRRKPEGIMIPTHLRLLTIEEKPFVYVRRMGDDEFRCEPDE 447
            .|:.|.|.:        .|||||.....|:|...||:.:.|.|     ...::.|
plant   426 VSHSSRRLR--------PIIWPGDTIFVPKGWEFPTNAKKLRI-----AVPKKDG---------- 467

  Fly   448 RPCPLFNN-----SDATANEFCCRGYCID----LLIELSKRINFTYDLALSPDGQFGHYILRNNT 503
                 |||     .|...|.....|:|||    ::.::...:::.|....:|||:     .|.:.
plant   468 -----FNNFVEVTKDENTNVPTVTGFCIDVFNTVMSQMPYAVSYEYIPFDTPDGK-----PRGSY 522

  Fly   504 GAMTLRKEWTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGITIL-EKKPSRSSTLVS 567
            ..|.    :...:||.     |..|...||...|:.|::|:.|:...||..| ..|..:......
plant   523 DEMV----YNVFLGEF-----DGAVGDTTILANRSHYVDFALPYSETGIVFLVPVKDGKEKGEWV 578

  Fly   568 FLQPFSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKAL--NLSSAVWFAWGVLL 630
            ||:|.:..||::...|...:.:::::         |:....:...|:.:  .:||..:|::..|.
plant   579 FLKPLTKELWLVTAASFLYIGIMVWI---------FEYQADEEFREQMIIDKISSVFYFSFSTLF 634

  Fly   631 NSGIGEGTP-RSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENL 694
               .....| .||..|||.:||....:|:..||||.|.:.|.::..:..:..::|  ||.:..|:
plant   635 ---FAHRRPSESFFTRVLVVVWCFVLLILTQSYTATLTSMLTVQELRPTVRHMDD--LRKSGVNI 694

  Fly   695 TCATVKGSSVDMYFRRQVELSNMYRTMEANNYATAEQA----IQDVKKGKLMAFIWDSSRLEYEA 755
            ...|  ||   ..|.|..::  .:.......|.:.|:.    :.....|.:.|...:.:.::...
plant   695 GYQT--GS---FTFERLKQM--RFDESRLKTYNSPEEMRELFLHKSSNGGIDAAFDEVAYIKLFM 752

  Fly   756 SKDC-ELVTAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIFHGHVQQNC-- 817
            :|.| |.......|...|:|.....|||....::..||...|...|:.::.:| |.|  :::|
plant   753 AKYCSEYSIIEPTFKADGFGFAFPLGSPLVSDISRQILNITEGDAMKAIENKW-FLG--EKHCLD 814

  Fly   818 ELFEKTPNTLGLKNMAGVFILVGVGIAGGVGLIIIEVI-----YKKHQVKKQKRL---------- 867
            .....:|..|...:...:|::|.|     |.:|::.::     |::.|......|
plant   815 STTSDSPIQLDHHSFEALFLIVFV-----VSVILLLLMLASRGYQERQHNASPNLPNDQANAAQE 874

  Fly   868 ------DIARHAADKWRGTIEKRKTIRASLAMQR 895
                  ::..|..:.....:.::|....::.::|
plant   875 EVNEEGNVGDHIVEVDTALVRRKKLTSNTIPIRR 908

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nmdar1	NP_730940.1	PBP1_iGluR_NMDA_NR1	37..405	CDD:380602	84/411 (20%)
		PBP2_iGluR_NMDA_Nr1	417..818	CDD:270437	91/420 (22%)
		CaM_bdg_C0	854..882	CDD:402271	4/48 (8%)
GLR2.5	NP_001332219.1	PBP1_GABAb_receptor_plant	38..421	CDD:380645	76/384 (20%)
		GluR_Plant	456..806	CDD:270404	86/405 (21%)
		Lig_chan	584..838	CDD:459656	58/277 (21%)