Protein Alignment Nmdar1 and GLR2.8

DIOPT Version :10

• Sequence 1: NP_730940.1
• Gene: Nmdar1 / 40665
• FlyBaseID: FBgn0010399
• Length: 997
• Species: Drosophila melanogaster
• Sequence 2: NP_001324459.1
• Gene: GLR2.8 / 817459
• AraportID: AT2G29110
• Length: 948
• Species: Arabidopsis thaliana
• Alignment Length: 930
• Identity: 184/930 - (19%)
• Similarity: 338/930 - (36%)
• Gaps: 241/930 - (25%)

  Fly   105 VVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIH------VSFLRTVP-------P 156
            ::.:||.|..:.|                |.|..|.|..|..:      :||..|.|       .
plant    93 LIQNEQVSAIIGP----------------IDSMQAKFMIKLANKTQVPTISFSATSPLLTSIKSD 141

  Fly   157 YY--------HQADVWLEMLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVELI 213
            |:        :|......:...|.:..|:.|:..:..|..|:.......|    ||.|..:|
plant   142 YFVRGTIDDSYQVKAIAAIFESFGWRSVVAIYVDNELGEGIMPYLFDALQ----DVQVDRSV--- 199

  Fly   214 VEFEPKLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTEQALF---- 274
            :..|...:...:.|..:.|.|:||::::.::..|..||..|.|..|..||:||::|.....
plant   200 IPSEANDDQILKELYKLMTRQTRVFVVHMASRLASRIFEKATEIGMMEEGYVWLMTNGMTHMMRH 264

  Fly   275 -----SNNTPDGVLGLQLEHAHSDKG-----------------HIRDSV-------YVLASAIKE 310
                 |.||.|||||:: .|....||                 .:||.:       |...:|:..
plant   265 IHHGRSLNTIDGVLGVR-SHVPKSKGLEDFRLRWKRNFKKENPWLRDDLSIFGLWAYDSTTALAM 328

  Fly   311 MISNETIAEAP-----------KDCGDSAVNWESGKRLFQYLKSRNITGETGQ------------ 352
            .:....|:..|           .|.|...|: ..|..|.:.|......|..|:
plant   329 AVEKTNISSFPYNNASGSSNNMTDLGTLHVS-RYGPSLLEALSEIRFNGLAGRFNLIDRQLESPK 392

  Fly   353 ---VAFDDNGDRIYAGY-----DVINIREQQKKHVVGKFSYDSMRAKMRMRINDSEIIWPGKQRR 409
               :.|..|.:|| .|:     .::|:...:.....|:              ....:|||||...
plant   393 FEIINFVGNEERI-VGFWTPSNGLVNVNSNKTTSFTGE--------------RFGPLIWPGKSTI 442

  Fly   410 KPEGIMIPTHLRLL----TIEEKPFVYVRRMGDDEFRCEPDERPCPLFNNSDATANEFCCRGYCI 470
            .|:|..|||:.:.:    .:::..|.:|..:.|            |:.|.:..       :||.|
plant   443 VPKGWEIPTNGKKIKVGVPVKKGFFNFVEVITD------------PITNITTP-------KGYAI 488

  Fly   471 DLLIELSKRINFT----YDLALSPDGQFGHYILRNNTGAMTLRKEWTGLIGELVNERADMIVAPL 531
            |:.....|::.::    |....|||..:...:.:.:.|.:                  |.:|..:
plant   489 DIFEAALKKLPYSVIPQYYRFESPDDDYDDLVYKVDNGTL------------------DAVVGDV 535

  Fly   532 TINPERAEYIEFSKPFKYQGITIL--EKKPSRSSTLVSFLQPFSNTLWILVMVSVHVVALVLYLL 594
            ||...|:.|.:|:.|:...|::::  .:.....:|.| ||:|:...||:.......::..|::|.
plant   536 TITAYRSLYADFTLPYTESGVSMMVPVRDNENKNTWV-FLKPWGLDLWVTTACFFVLIGFVVWLF 599

  Fly   595 DRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFS---------ARVLGMV 650
            :.        ..::|........:.::.||::..::           |:         ||.:.:|
plant   600 EH--------RVNTDFRGPPHHQIGTSFWFSFSTMV-----------FAHREKVVSNLARFVVVV 645

  Fly   651 WAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSSVDMY----FRRQ 711
            |....:::..||||||.:||.::|.:.....:.|             .:|......|    |.:.
plant   646 WCFVVLVLTQSYTANLTSFLTVQRFQPAAINVKD-------------LIKNGDYVGYQHGAFVKD 697

  Fly   712 VELSNMYRTMEANNYATAEQAIQDVKKGKLMAFIWDSSRLEYEASKDCELVTAGE-LFGRSGYGI 775
            ..:...:...:...:.::|:....:..|.:.|...:.:.|....|:.|......| .|..:|:|.
plant   698 FLIKEGFNVSKLKPFGSSEECHALLSNGSISAAFDEVAYLRAILSQYCSKYAIVEPTFKTAGFGF 762

  Fly   776 GLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIFHGHVQQNCELFEKT---PNTLGLKNMAGVFI 837
            ...:.||.|..|:.|||...:...|:.::.:|...   |.:|. ..||   .|.|.|::..|:|:
plant   763 AFPRNSPLTGDVSKAILNVTQGDEMQHIENKWFMK---QNDCP-DPKTALSSNRLSLRSFWGLFL 823

  Fly   838 LVGVGIAGGVGLIIIEVIY---KKHQVKKQKRLDIARHAADKWRGTIE---KRKTIRASLAMQRQ 896
            :  .|||..:.|:|...::   .:|.:.......|.|.....:|...|   |..|.::|..
plant   824 I--AGIASFLALLIFVFLFLYENRHTLCDDSEDSIWRKLTSLFRNFDEKDIKSHTFKSSAV---- 882

  Fly   897 YNVGLNSTH---APGTISLA 913
            ::|....|.   :|.|:.:|
plant   883 HHVSSPMTQYIPSPSTLQIA 902

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nmdar1	NP_730940.1	PBP1_iGluR_NMDA_NR1	37..405	CDD:380602	76/384 (20%)
		PBP2_iGluR_NMDA_Nr1	417..818	CDD:270437	76/424 (18%)
		CaM_bdg_C0	854..882	CDD:402271	4/30 (13%)
GLR2.8	NP_001324459.1	PBP1_GABAb_receptor_plant	35..419	CDD:380645	73/351 (21%)
		GluR_Plant	454..795	CDD:270404	72/410 (18%)