Sequence 1: | NP_730940.1 | Gene: | Nmdar1 / 40665 | FlyBaseID: | FBgn0010399 | Length: | 997 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005161118.1 | Gene: | grin1a / 767745 | ZFINID: | ZDB-GENE-051202-1 | Length: | 951 | Species: | Danio rerio |
Alignment Length: | 980 | Identity: | 439/980 - (44%) |
---|---|---|---|
Similarity: | 606/980 - (61%) | Gaps: | 89/980 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 VLLVAPIDAAQRHTASDNPSTYNIGGVLSNSDSEEHFSTTIKHLNFDQQYVPRKVTYYDKTIRMD 82
Fly 83 KNPIKTVFNVCDKLIENRVYAVVVSHEQTSGD-LSPAAVSYTSGFYSIPVIGISSRDAAFSDKNI 146
Fly 147 HVSFLRTVPPYYHQADVWLEMLSHFAYTKVIIIHSSDTDGRAILGRFQT--------TSQTYYDD 203
Fly 204 VDVRA-------TVELIVEFEPKLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTG 261
Fly 262 EGHVWIVTEQALFS---NNTPDGVLGLQLEHAHSDKGHIRDSVYVLASAIKEMISNETIAEAPKD 323
Fly 324 CGDSAVNWESG---KRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFSY 385
Fly 386 DSMRAKMRMRINDSEIIWPGKQRRKPEGIMIPTHLRLLTIEEKPFVYVRRMGDDEFRCEPDERPC 450
Fly 451 PLF---------------NNSDATANEFCCRGYCIDLLIELSKRINFTYDLALSPDGQFGHYILR 500
Fly 501 NNTGAMTLRKEWTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTL 565
Fly 566 VSFLQPFSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLL 630
Fly 631 NSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLT 695
Fly 696 CATVKGSSVDMYFRRQVELSNMYRTMEANNYATAEQAIQDVKKGKLMAFIWDSSRLEYEASKDCE 760
Fly 761 LVTAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIFHGHVQQNCELFEKTPN 825
Fly 826 TLGLKNMAGVFILVGVGIAGGVGLIIIEVIYKKHQVKKQKRLDIARHAADKWR---------GTI 881
Fly 882 EKRKTIRASLAMQRQYNVGLNSTHAPGTISLAVDKRR------YPRLGQRLGPERAWPGDAADVL 940
Fly 941 RIRRP 945 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nmdar1 | NP_730940.1 | PBP1_iGluR_NMDA_NR1 | 12..405 | CDD:107374 | 143/408 (35%) |
ANF_receptor | 58..371 | CDD:279440 | 123/334 (37%) | ||
PBP2_iGluR_NMDA_Nr1 | 417..818 | CDD:270437 | 248/415 (60%) | ||
HisJ | 451..>558 | CDD:223904 | 59/121 (49%) | ||
Periplasmic_Binding_Protein_Type_2 | <516..651 | CDD:304360 | 100/134 (75%) | ||
Lig_chan | 575..838 | CDD:278489 | 177/262 (68%) | ||
CaM_bdg_C0 | 854..882 | CDD:287524 | 9/36 (25%) | ||
grin1a | XP_005161118.1 | PBP1_iGluR_NMDA_NR1 | 5..401 | CDD:107374 | 142/406 (35%) |
ANF_receptor | 54..372 | CDD:279440 | 120/320 (38%) | ||
PBP2_iGluR_NMDA_Nr1 | 413..819 | CDD:270437 | 248/415 (60%) | ||
Lig_chan | 581..844 | CDD:278489 | 179/267 (67%) | ||
CaM_bdg_C0 | 855..883 | CDD:287524 | 8/27 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170574586 | |
Domainoid | 1 | 1.000 | 356 | 1.000 | Domainoid score | I941 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H7187 | |
Inparanoid | 1 | 1.050 | 763 | 1.000 | Inparanoid score | I528 |
OMA | 1 | 1.010 | - | - | QHG49285 | |
OrthoDB | 1 | 1.010 | - | - | D108757at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 1 | 1.000 | - | - | otm26608 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_107231 | |
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4690 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.940 |