Sequence 1: | NP_730940.1 | Gene: | Nmdar1 / 40665 | FlyBaseID: | FBgn0010399 | Length: | 997 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_741822.2 | Gene: | glr-6 / 180955 | WormBaseID: | WBGene00001617 | Length: | 844 | Species: | Caenorhabditis elegans |
Alignment Length: | 887 | Identity: | 200/887 - (22%) |
---|---|---|---|
Similarity: | 373/887 - (42%) | Gaps: | 200/887 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 83 KNPIKTVFNVC-----DKLIENR---------VYAVVVSHEQTSG---DLSPAAVSYTSGFYSIP 130
Fly 131 VIGISSRDAA------FSDKNIHVSFLRTVPPYYHQADVWLEMLSHFAYTKVIIIHSSDTDGRAI 189
Fly 190 LGRFQTTSQTY-YDDVDV-RATVELIVEFEPKLESFTEHLID---MKTA---------------Q 234
Fly 235 SRVYLMYASTEDAQVIFRDAG-EYNMTGEGHVWIVTEQAL------FSNNTPDGVLGLQLEHAHS 292
Fly 293 DKGHIRDSVYVLASAIKEMISNETIAEAP-------KD---------------------CGDSAV 329
Fly 330 NWESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHV-------------VG 381
Fly 382 KFSYDSMRAKMRMRINDSEIIWPGKQRRKPEGIMIPTHLRLLTIEEKPFVYVRRMGDDEFRCEPD 446
Fly 447 ERPCPLFNNSDATANEFCCRGYCIDLLIELSKRINFTYDLALSPDGQFGHYILRNNTGAMTLRKE 511
Fly 512 WTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPS--RSSTLVSFLQPFSN 574
Fly 575 TLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTP 639
Fly 640 RSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSSV 704
Fly 705 DMYFRRQVE-LSNMYRTMEANN----YATAEQAIQDVKKGKLMAFIWDSSRLEYEASKDCELVTA 764
Fly 765 GE-LFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIFHGHVQQNCELF--EKTPNT 826
Fly 827 LGLKNMAGVFILVGVGIAGGVGLIIIEVIYKKHQV--KKQKR 866 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nmdar1 | NP_730940.1 | PBP1_iGluR_NMDA_NR1 | 12..405 | CDD:107374 | 69/412 (17%) |
ANF_receptor | 58..371 | CDD:279440 | 65/365 (18%) | ||
PBP2_iGluR_NMDA_Nr1 | 417..818 | CDD:270437 | 113/408 (28%) | ||
HisJ | 451..>558 | CDD:223904 | 35/106 (33%) | ||
Periplasmic_Binding_Protein_Type_2 | <516..651 | CDD:304360 | 41/136 (30%) | ||
Lig_chan | 575..838 | CDD:278489 | 68/270 (25%) | ||
CaM_bdg_C0 | 854..882 | CDD:287524 | 5/15 (33%) | ||
glr-6 | NP_741822.2 | PBP1_iGluR_non_NMDA-like | 21..394 | CDD:380591 | 69/410 (17%) |
PBP2_iGluR_Kainate | 409..764 | CDD:270432 | 111/400 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S4386 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.860 |