Sequence 1: | NP_730940.1 | Gene: | Nmdar1 / 40665 | FlyBaseID: | FBgn0010399 | Length: | 997 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_032192.2 | Gene: | Grid1 / 14803 | MGIID: | 95812 | Length: | 1009 | Species: | Mus musculus |
Alignment Length: | 1058 | Identity: | 243/1058 - (22%) |
---|---|---|---|
Similarity: | 442/1058 - (41%) | Gaps: | 196/1058 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 37 STYNIGGVLSNSDSEEH--FSTTIKHLNFDQQYV-PRKVTYYDKTIRMDKNPIKTVFNVCDKLIE 98
Fly 99 NRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHVS--------FLRTVP 155
Fly 156 PYYHQADVWLEMLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPKL 220
Fly 221 ES--FTEHLIDMKTAQSRVY-------LMYASTEDAQVIFRDAGEYNMTGEGHVWIVTEQALFSN 276
Fly 277 NTPD---GVLG------------------LQLEHAHS------DKGHIR----------DSVYVL 304
Fly 305 ASAI-KEMISNETIAEAPKDC-GDSAVNWESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYD 367
Fly 368 VINIREQQKKHVVGKFSYDSMRAKMRMRINDSEIIWPGKQRRKPEGIMIP-THLRLLTIEEKPFV 431
Fly 432 YVRRMGDDEFRCEPDERPCPLFNNSDATANEFCCRGYCIDLLIELSKRINFTYDLALSPDGQFGH 496
Fly 497 YILRNNTGAMTLRKEWTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSR 561
Fly 562 SSTLVSFLQPFSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAW 626
Fly 627 GVLLNSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 691
Fly 692 ENLTCATVKGSSVDMYFR--------RQVELSNMYRTMEANNYA-----TAEQAIQDVKKGKLMA 743
Fly 744 FIWDSSRLEYEA--SKDCELVTAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQ 806
Fly 807 WIFHGHVQQNCELFEKTP-----NTLGLKNMAGVFILVGVGIAGGVGLIIIEVIYKKHQVKKQKR 866
Fly 867 LDIARHAADKWRGTIEKRKTIRASLAMQRQYNVGLNS------TH---APGTISLAVDKRRYPRL 922
Fly 923 GQRLGPERAWPGDAADVLRIRRPYELGNPGQSPKVMAANQPGMPMPM------------------ 969
Fly 970 -LGKTRPQQSVLPPRYSP 986 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nmdar1 | NP_730940.1 | PBP1_iGluR_NMDA_NR1 | 12..405 | CDD:107374 | 84/426 (20%) |
ANF_receptor | 58..371 | CDD:279440 | 73/369 (20%) | ||
PBP2_iGluR_NMDA_Nr1 | 417..818 | CDD:270437 | 123/416 (30%) | ||
HisJ | 451..>558 | CDD:223904 | 34/106 (32%) | ||
Periplasmic_Binding_Protein_Type_2 | <516..651 | CDD:304360 | 39/134 (29%) | ||
Lig_chan | 575..838 | CDD:278489 | 83/282 (29%) | ||
CaM_bdg_C0 | 854..882 | CDD:287524 | 1/27 (4%) | ||
Grid1 | NP_032192.2 | Interaction with CBLN1. /evidence=ECO:0000269|PubMed:27418511 | 21..436 | 87/439 (20%) | |
PBP1_iGluR_delta_1 | 25..423 | CDD:107387 | 83/423 (20%) | ||
PBP2_iGluR_delta_1 | 436..806 | CDD:270448 | 122/406 (30%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 931..960 | 5/30 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |