DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nmdar1 and Ir25a

DIOPT Version :10

Sequence 1:NP_730940.1 Gene:Nmdar1 / 40665 FlyBaseID:FBgn0010399 Length:997 Species:Drosophila melanogaster
Sequence 2:XP_319463.5 Gene:Ir25a / 1279695 VectorBaseID:AGAMI1_004282 Length:946 Species:Anopheles gambiae


Alignment Length:908 Identity:209/908 - (23%)
Similarity:359/908 - (39%) Gaps:260/908 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 YDKTIRMD------------KNPIKTVFNVCDKL----------IENRVYAVVVSHEQTSGDLSP 117
            ||.|..||            ::.|.|:.:..|:.          |.|  :.::.|.......|..
Mosquito   182 YDNTFVMDHKYKALLQNIPTRHVITTIADDRDRASQIEKLRNLDINN--FFILGSLASIKQVLES 244

  Fly   118 AAVSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPPYYHQADVWLEMLSHFAYTKVIIIHSS 182
            |...|....::..||....:|...:.:|..:.|||.:                           |
Mosquito   245 AKNEYFERNFAWHVITQEQKDLTCNVENATIMFLRPM---------------------------S 282

  Fly   183 DTDGRAILGRFQTT---------SQTYYDDVDVRATVELIVEFEPKLESFTEHLIDMKTAQSRVY 238
            |:..:..||..:||         :..:|.|:.:||.:.:            ::::...:..|.  
Mosquito   283 DSSSKDRLGSIRTTYNLKQEPQITGFFYFDLTLRALIAI------------KNILQSGSWPSN-- 333

  Fly   239 LMYASTEDAQVIFRDAGEYNMTGEGHVWIVTEQALFSNNTPDGVLGLQLEHAHSDKGHIRDSVYV 303
            :.|.:.||          |:.|                |||:..:.|:                 
Mosquito   334 MKYITCED----------YDGT----------------NTPNHTIDLK----------------- 355

  Fly   304 LASAIKEMISNETIA--EAPKDCGDSAVNWESGKRLFQ---YLKSRNITGETGQVAFDDNGDRIY 363
              :|..|:....|..  |.||          .||..|.   |:|          ...|.|...|.
Mosquito   356 --TAFIEVTEPTTFGPFEIPK----------GGKMQFNGNTYMK----------FDMDINAVSIR 398

  Fly   364 AGYDVINIREQQKKHVVGKFSYDSMRAKMRMRI---NDSEIIWPGKQRRKPEGIMIPTHLRLLTI 425
            :|..| |.|           |..:..|.:...|   |::||          :.:......|:.|:
Mosquito   399 SGASV-NTR-----------SLGTWEASLNAPINVANEAEI----------KNLTADVVYRVYTV 441

  Fly   426 EEKPFVYVRRMGDDEFRCEPDERPCPLFNNSDATANE-FCCRGYCIDLLIELSKRINFTYDLALS 489
            .:.||:.                       .|.||.: |  :|||||||.::::.:.|.|::...
Mosquito   442 VQAPFIM-----------------------RDPTAPKGF--KGYCIDLLNKIAEIVEFDYEIREV 481

  Fly   490 PDGQFGHYILRNNTGAMTLRKEWTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQ--GI 552
            .||:||:   .|..|      ||.|::.:|::::||:.:..:::..||...|:|:.|: |.  ||
Mosquito   482 EDGKFGN---MNENG------EWNGIVRKLIDKQADIGLGSMSVMAERETVIDFTVPY-YDLVGI 536

  Fly   553 TILEKKPSRSSTLVSFLQPFSNTLWILVMVSVHVVALVLYLLDRFSPF----GRFKLSHSDSNEE 613
            :|:.:.||..|:|..||......:|:.::.:....:.::::.||:||:    .|.|..:.|  |:
Mosquito   537 SIMMQLPSTPSSLFKFLTVLETNVWLCILAAYFFTSFLMWIFDRYSPYSYQNNREKYKNDD--EK 599

  Fly   614 KALNLSSAVWFAWGVLLNSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTK 678
            :..|:...:||....|...|.|| .|::.|.|::...|..|..||:|||||||||||.:.|..|.
Mosquito   600 REFNIKECLWFCMTSLTPQGGGE-APKNLSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLDTP 663

  Fly   679 LSGINDARLRNTMENLTCATVKGSSVDMYFRRQVELS----NMYRTMEANNYATA---------- 729
            :..::|.   :....:..|.:.|||...||:|..::.    .:::.|..|:..||          
Mosquito   664 VESLDDL---SKQYKILYAPLNGSSAMTYFQRMADIEAKFYEIWKEMSLNDSLTAVERSKLAVWD 725

  Fly   730 -----------------------EQAIQDVKKGKL---MAFIWDSSRLEYEASKDCELVTAGELF 768
                                   |:|:|.::....   .||:.|::.:.|:...:|:|...||.|
Mosquito   726 YPVSDKYTKMWQAMLEAGLPNSLEEAVQRIRNSTSASGFAFLGDATDIRYQVLTNCDLQMVGEEF 790

  Fly   769 GRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIFHGHVQQNCELFEKTPNTLGLKNMA 833
            .|..|.|.:|:|||..|....|||.......:|||.:||..:..||..||..:...:.:.::|:.
Mosquito   791 SRKPYAIAVQQGSPLKDQFNNAILMLLNRRELEKLKEQWWKNDDVQNKCEKPDDQSDGISIQNIG 855

  Fly   834 GVFILVGVGIAGGVGLIIIEVIYKKHQVKKQKRLDIARHAADKWRGTIEKRKTIRASLAMQRQ 896
            ||||::.|||......::.|..|.|:: ...|.:|:|.....:..|||.  |.:|.:..:.:|
Mosquito   856 GVFIVIFVGIGMACITLLFEFWYYKYR-NNSKVIDVAESTDQQHGGTIV--KNVRPAGKLMKQ 915

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nmdar1NP_730940.1 PBP1_iGluR_NMDA_NR1 37..405 CDD:380602 65/368 (18%)
PBP2_iGluR_NMDA_Nr1 417..818 CDD:270437 122/447 (27%)
CaM_bdg_C0 854..882 CDD:402271 7/27 (26%)
Ir25aXP_319463.5 None

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