DRSC/TRiP Functional Genomics Resources

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Protein Alignment NKCC and SLC12A6

DIOPT Version :10

Sequence 1:NP_730938.1 Gene:NKCC / 40663 FlyBaseID:FBgn0051547 Length:1068 Species:Drosophila melanogaster
Sequence 2:NP_598408.1 Gene:SLC12A6 / 9990 HGNCID:10914 Length:1150 Species:Homo sapiens


Alignment Length:1285 Identity:317/1285 - (24%)
Similarity:522/1285 - (40%) Gaps:377/1285 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QISKVNGTANAGYDGEARSAESDQTDAAHPLPPTSNENHL-----------------------HP 47
            :|..:.|.::...|..:||:...:..:...:|.||....:                       ||
Human    21 KIDDIPGLSDTSPDLSSRSSSRVRFSSRESVPETSRSEPMSEMSGATTSLATVALDPPSDRTSHP 85

  Fly    48 K-------ASGETGEN-------RRSSRLSFRGFGNFLRKSDA--ERKFSLAQLTKESLPRLDNY 96
            :       .:..|||:       .:.:|.::....|: .:.|.  ::..:|.:...::.|::.:.
Human    86 QDVIEDLSQNSITGEHSQLLDDGHKKARNAYLNNSNY-EEGDEYFDKNLALFEEEMDTRPKVSSL 149

  Fly    97 RISMRNLKRPSIGELQGEAVDQSITIPEPEPEATGGHIKLGWIVGVLIPCLLNIWGVMLFLRLSW 161
            ...|.|....:.|..:.|.. ::||..:.:|..|.   ::|..:||.:|||.||:||:|||||:|
Human   150 LNRMANYTNLTQGAKEHEEA-ENITEGKKKPTKTP---QMGTFMGVYLPCLQNIFGVILFLRLTW 210

  Fly   162 VVAESGILQSLIIITISAVVCVITTLSLSAISTNGEVKGGGVYFIISRSLGPEFGASVGVVFAFA 226
            ||..:|:||:..|:.|.....::|.:|:|||:|||.|..||.||:|||:||||||.:||:.|...
Human   211 VVGTAGVLQAFAIVLICCCCTMLTAISMSAIATNGVVPAGGSYFMISRALGPEFGGAVGLCFYLG 275

  Fly   227 NAVSASMNTIGFCESLNVLL--------KNNDLKIVDNGINDIRIVGSITVLVLILICCVGMEWE 283
            ...:|:|..:|..|...|.:        .::.||.....:|::|:.|:..:::::|:..:|:.:.
Human   276 TTFAAAMYILGAIEIFLVYIVPRAAIFHSDDALKESAAMLNNMRVYGTAFLVLMVLVVFIGVRYV 340

  Fly   284 TK-AQNFL--IVTIVLAIFNFLIGAAIGPQ-------GNEEQISR-------------------- 318
            .| |..||  ::..:|||:...|.::..|.       ||....||                    
Human   341 NKFASLFLACVIVSILAIYAGAIKSSFAPPHFPVCMLGNRTLSSRHIDVCSKTKEINNMTVPSKL 405

  Fly   319 ----------------------------GFVGFSWATLKENFGSDYRYAEG-------------- 341
                                        |..|.:...:.||..|:| ..:|              
Human   406 WGFFCNSSQFFNATCDEYFVHNNVTSIQGIPGLASGIITENLWSNY-LPKGEIIEKPSAKSSDVL 469

  Fly   342 --VNHDFFSV---------FAIFFPSVTGIQAGANICGDLKDAGAAIPKGTFWSLL----ISMSS 391
              :||::..|         ..|||||||||.||:|..||||||..:||.||..::|    :.:|:
Human   470 GSLNHEYVLVDITTSFTLLVGIFFPSVTGIMAGSNRSGDLKDAQKSIPIGTILAILTTSFVYLSN 534

  Fly   392 YALFVLFAGGAAVRDASGIPADLVNGTIVSSELPCMATGNCTWGLFNSYEMMQEMSLWGPLIYAG 456
            ..||.....|..:||..|   |.|.|.:|        .|..:|           .|.|  :|..|
Human   535 VVLFGACIEGVVLRDKFG---DAVKGNLV--------VGTLSW-----------PSPW--VIVIG 575

  Fly   457 CFAATLSTALTNLLSVPRLVQALGIDQIYPGLIFF--SKPYGKHGEPYRGYVLTFFITTGFLLIG 519
            .|.:|....|.:|...|||:||:..|.|.|.|..|  ||   .:|||....:||..|....:||.
Human   576 SFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGHSK---ANGEPTWALLLTAAIAELGILIA 637

  Fly   520 ELNLIAPLISTFYLASYALINFCTFHAAFVKPLGWRPTFKYYNAWLSLFGFAMCVAIMFLINYVA 584
            .|:|:||::|.|:|..|..:|........::...|||.|:||:..||..|.::|:|:||:.::..
Human   638 SLDLVAPILSMFFLMCYLFVNLACALQTLLRTPNWRPRFRYYHWALSFMGMSICLALMFISSWYY 702

  Fly   585 AIITFGIIFALYLVVMYRKPEANWGSTTQAQQYKAALMAVHRLQNVSDHVKNYHPQVLV---LSG 646
            ||:...|...:|..:.|:..|..||...:.....||..|:.||:....|.||:.||:||   |..
Human   703 AIVAMVIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARFALLRLEEGPPHTKNWRPQLLVLLKLDE 767

  Fly   647 DPKTR-PPLVDFGYLLTKNNSLMFVANIIPVRVG------------YKNRQHLVKDGQKYLDARK 698
            |...: |.|:.|...|.....|..|.::|   ||            .:..:||       ::|.|
Human   768 DLHVKHPRLLTFASQLKAGKGLTIVGSVI---VGNFLENYGEALAAEQTIKHL-------MEAEK 822

  Fly   699 IKAFYNVIDGFSLEDGINALTKSTGFGKMSPNIVLVGYKPDWNRCRKEEVESYFSILYNAFSQRM 763
            :|.|..::....|.:||:.|.:|.|.|.|..|.|::|:...|   |:.|         :|.:.:.
Human   823 VKGFCQLVVAAKLREGISHLIQSCGLGGMKHNTVVMGWPNGW---RQSE---------DARAWKT 875

  Fly   764 GVALLRLPNGLDFSELSSEVTLPANGMGHMHTANAHGFTNELMPAANAASELLHIDSNLNLASMD 828
            .:..:|:                        |..||                        ||.:.
Human   876 FIGTVRV------------------------TTAAH------------------------LALLV 892

  Fly   829 SPNSSFTMPQPAPMPNMQRNSRSYKVTSSDEPAVTYHTKGGSDIPQNLLDAMTIFTRKQPKGTID 893
            :.|.||                                     .|.|:        .:..:|.||
Human   893 AKNISF-------------------------------------FPSNV--------EQFSEGNID 912

  Fly   894 VFWLYDDGGLTILLPYIISMRSHWQNSKLRVFAMCHGKDEE-QEEKSMASLLTKFRIK------- 950
            |:|:..|||:.:|||:::.....|:...:|:|.:...:|.. |.:|.:|:.|...||:       
Human   913 VWWIVHDGGMLMLLPFLLKQHKVWRKCSIRIFTVAQLEDNSIQMKKDLATFLYHLRIEAEVEVVE 977

  Fly   951 ----------YSELIMLKGVSEQPRADTVLKHKRLIEPFR-RGA-----RNEF-------GITDD 992
                      |...:|::..|:      :|:|.||.:..| |.|     ||..       ...|:
Human   978 MHDSDISAYTYERTLMMEQRSQ------MLRHMRLSKTERDREAQLVKDRNSMLRLTSIGSDEDE 1036

  Fly   993 ELQSMSEKT---------------------------------------NRQLRIHELVVKHSSNA 1018
            |.::..||.                                       :..::::|::|..|..|
Human  1037 ETETYQEKVHMTWTKDKYMASRGQKAKSMEGFQDLLNMRPDQSNVRRMHTAVKLNEVIVNKSHEA 1101

  Fly  1019 SLVVMSLPMPRKEAISAPLYMSWLEMLTSDMKCPVALARGNQTPVLTLYS 1068
            .||::::|.|.:.......||.:||:||..:: .|.|.||..:.|:|:||
Human  1102 KLVLLNMPGPPRNPEGDENYMEFLEVLTEGLE-RVLLVRGGGSEVITIYS 1150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NKCCNP_730938.1 AA_permease_2 85..1068 CDD:459263 298/1165 (26%)
SLC12A6NP_598408.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..66 8/44 (18%)
2a30 109..1150 CDD:273347 302/1195 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 161..181 5/20 (25%)
Scissor helix. /evidence=ECO:0000269|PubMed:33199848, ECO:0000269|PubMed:34031912, ECO:0007744|PDB:6M1Y, ECO:0007744|PDB:6Y5R, ECO:0007744|PDB:6Y5V, ECO:0007744|PDB:7AIN, ECO:0007744|PDB:7AIO, ECO:0007744|PDB:7D90, ECO:0007744|PDB:7NGB 682..691 3/8 (38%)
Interaction with CKB. /evidence=ECO:0000269|PubMed:18566107 1133..1150 6/17 (35%)

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