DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NKCC and VHC1

DIOPT Version :10

Sequence 1:NP_730938.1 Gene:NKCC / 40663 FlyBaseID:FBgn0051547 Length:1068 Species:Drosophila melanogaster
Sequence 2:NP_009794.3 Gene:VHC1 / 852537 SGDID:S000000439 Length:1120 Species:Saccharomyces cerevisiae


Alignment Length:1221 Identity:286/1221 - (23%)
Similarity:462/1221 - (37%) Gaps:333/1221 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 FLRKSDAERKFSLAQLTKESLPRLDNYRISMRNLKRPSIGELQGEAVDQSITIPEPEPEATGGHI 134
            |.:.....|..|....:.||...|...|||.......:..|.|  .|........|..:      
Yeast     5 FYQIPGTHRPSSAISSSNESSSLLSARRISQTYFNYQATPECQ--KVSSKYDPDNPNKD------ 61

  Fly   135 KLGWIVGVLIPCLLNIWGVMLFLRLSWVVAESGILQSLIIITISAVVCVITTLSLSAISTNGEVK 199
            |||...||.:|..||:..:::|||..:::.:.||:.::.::.:|..:.::||||:|||||||.|:
Yeast    62 KLGTYDGVFVPTALNVLSILMFLRFGFILGQLGIICTIGLLLLSYTINLLTTLSISAISTNGTVR 126

  Fly   200 GGGVYFIISRSLGPEFGASVGVVFAFANAVSASMNTIGFCESLNVLLKNNDLKIVDNGINDIRIV 264
            |||.|::||||||||||.|:|:||......:|.||.:|..|.|...|..:........:.::...
Yeast   127 GGGAYYMISRSLGPEFGGSIGLVFFLGQVFNAGMNAVGIIEPLLYNLGYSAQGEPPAALGELLPR 191

  Fly   265 G---SITVLVLILICC-----VGMEWETKAQNFLIVTIVLAIFNFLIGAAIGPQGNEEQISRGFV 321
            |   ..|...:||..|     ||.:..::|.|.|.:.:..:||:..:.|.|.....|..||  :.
Yeast   192 GHWHEFTYATVILFLCFSVAFVGSQTVSRAGNILFLVLAASIFSIPLSALIRSPFTEGGIS--YT 254

  Fly   322 GFSWATLKENF------GSDYRYAEGVNHDFFSVFAIFFPSVTGIQAGANICGDLKDAGAAIPKG 380
            |.||.|..:|.      |:.....:| ...|..:|.:|||:..||.|||.:..:|:....:||||
Yeast   255 GPSWQTFHDNLLPHLTKGAAGSLLKG-KETFNDLFGVFFPATAGIFAGAGMSSELRKPSKSIPKG 318

  Fly   381 TFWSLLISMSSYALFVLFAGGAAVRDASGIPADLVNGTIVSSELPCMATGNCTWGLFNSYEMMQE 445
            |.|.||.:...||: |:|:.|.::...|                           |::..:::|.
Yeast   319 TLWGLLFTFICYAV-VVFSMGCSIPRRS---------------------------LYDEVQIIQT 355

  Fly   446 MSLWGPLIYAGCFAATLSTALTNLLSVPRLVQALGIDQIYPGL-IFFSKPYGKHGEPYRGYVLTF 509
            :|....:|:.|..|.:|.:.:..:|....:::|:..|.|.||| ||...|.         |.|.|
Yeast   356 ISSVQWVIFMGEMATSLFSIIVGMLGAAYVLEAIAKDNIIPGLEIFAHSPL---------YSLIF 411

  Fly   510 -FITTGFLLIGELNLIAPLISTFYLASYALINFCTFHAAFVKPLGWRPTFKYYNAWLSLFGFAMC 573
             :|.|...|..::|.||..|:..:|.::.::|...|.........:||:|||:|.:.:..|..:.
Yeast   412 TWILTQLCLFSDVNKIATFITMTFLMTFVVMNLACFLLGISSAPNFRPSFKYFNRYTTAIGALLS 476

  Fly   574 VAIMFLINYVAAIITFGIIFALYLVVMYRKPEANWGSTTQAQQYKAALMAVHRLQNVSDHVKNYH 638
            |..|.:::.::|.:.|..:..|:|.:.|..|..:||..:|:..|......:.||:  .|::|.:.
Yeast   477 VVAMLIVDGISASVLFLAMILLFLFIHYFSPPKSWGDVSQSLIYHQVRKYLLRLR--QDNIKYWR 539

  Fly   639 PQVLVLSGDPKTRPPLVDFGYLLTKNNSLMFVANIIPVRVGYKNRQHLVKDGQ----KYLDARKI 699
            ||:|:...:|:|...|:.|...|.|..  :::...:.|...:..:.:.:|..|    |..|...|
Yeast   540 PQILLFVDNPRTSWNLIRFCNHLKKGG--LYILGHVAVTADFPKQLNELKTQQKAWMKIRDMAAI 602

  Fly   700 KAFYNVIDGFSLEDGINALTKSTGFGKMSPNIVLVGYKPDWNRCRKEEVESYFSILYNAFSQRMG 764
            |||..|..|.||..||..:...:|.|.|.|||.:||:         .::|||          |..
Yeast   603 KAFVQVGTGPSLIWGIRNVFIGSGLGGMKPNITVVGF---------FDLESY----------RKH 648

  Fly   765 VALLRLPNGLD-------------FSELSSEVTLPAN--------------------GMGHMHTA 796
            :...|..|.|.             .|::...|.||.:                    .:...:.|
Yeast   649 IPQSRSQNNLQKQVEIKATVPRSTCSDVKINVPLPTDECKNETKVNVQQWVQIVEDLSLMQSNIA 713

  Fly   797 NAHGFTN-EL-----------------------------MPAANAAS------------------ 813
            .||||.| |:                             .|||...:                  
Yeast   714 IAHGFKNLEIPNKRDSCFPKKTIDLYPIQMCGKVEAKGDQPAAITTNFDTYTLILQLAAILVTVP 778

  Fly   814 -------------------------------ELLHIDSNLNLASMD------------------- 828
                                           ::|.||:.:.:.|:|                   
Yeast   779 EWKRTHSLRVILFVEQEYHRTNETQRMKKLLQVLRIDAEVLVVSLDQFRVYNTIVKGDPIVFDYV 843

  Fly   829 --------------------SPNSSFTMPQPAPMPNMQRNSRSYKVTSSDEPAVTYHTKGGSDIP 873
                                .|...|:..:|..:......||.|             |.|    .
Yeast   844 NSKLADNEWWKDLVEARDTLKPKRRFSTIEPQTIAKQFTQSRKY-------------TSG----V 891

  Fly   874 QNLLDAMTIFTRKQPKGTIDVFWLYDDGGLTILLPYIISMRSHWQNSKLRVFAMCHGKDEEQEEK 938
            |.|..:.|:.|| .|...||.....:|..|...|..|....|...|..:       |||...:.|
Yeast   892 QKLGVSFTMNTR-MPTNRIDTPCESEDSDLDTDLTSIRDAFSASTNISV-------GKDLTTKSK 948

  Fly   939 S---MASLLTK----------FRIKYSE------LIMLKGVSEQPRADTVLKHKRLIEP-FRRGA 983
            :   ..:||.|          .|..:|.      .::..|..|||   |::.   :.|| ...|.
Yeast   949 TGSDRTNLLVKNLQSDVSTQSLRPVFSSNTLPRTRVVEDGTGEQP---TLIP---IAEPDLSNGN 1007

  Fly   984 RNEFGI------------------TDDELQSMSE--------KTNRQLRIHELVVKHSSNASLVV 1022
            ....||                  :.|.|.:..:        .|.:.|.:::::.:.|.::.|:.
Yeast  1008 GTGSGIGNGNKLKKPVLPELSPCCSKDSLVTAMQNLGFNDLPSTAQHLVLNDVMTQMSKSSDLIF 1072

  Fly  1023 MSLPMP---RKEAISAPL-YMS----WLEMLTSDMKCPVALARGNQTPVLT 1065
            .:||:|   ..|...|.| |:.    |||.|      |..:...:||..:|
Yeast  1073 STLPVPALGTHEDHDASLQYVEDLDIWLEGL------PPCMLINSQTMTVT 1117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NKCCNP_730938.1 AA_permease_2 85..1068 CDD:459263 283/1206 (23%)
VHC1NP_009794.3 AA_permease_2 45..824 CDD:459263 214/849 (25%)

Return to query results.
Submit another query.