DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NKCC and CCC1

DIOPT Version :9

Sequence 1:NP_730938.1 Gene:NKCC / 40663 FlyBaseID:FBgn0051547 Length:1068 Species:Drosophila melanogaster
Sequence 2:NP_174333.2 Gene:CCC1 / 839924 AraportID:AT1G30450 Length:975 Species:Arabidopsis thaliana


Alignment Length:1091 Identity:259/1091 - (23%)
Similarity:464/1091 - (42%) Gaps:261/1091 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 ETGEN--RRSSRLSFRGFGNF-----LRKSDAERKFSLAQLTKESLPRLDNYRISMRNLKRPSIG 109
            |.|.|  ::.|:|...||.:.     |:....|      |:...|.||                 
plant    72 EDGVNGHQKESKLELFGFDSLVNILGLKSMTGE------QIQAPSSPR----------------- 113

  Fly   110 ELQGEAVDQSITIPEPEPEATGGHIKLGWIVGVLIPCLLNIWGVMLFLRLSWVVAESGILQSLII 174
              .||  |.|||...|:|.|    :|:|.::||.:|||.||.|::.::|.:|:|..:||.|.|::
plant   114 --DGE--DISITQGHPKPPA----LKMGTMMGVFVPCLQNILGIIYYIRFTWIVGMAGIGQGLVL 170

  Fly   175 ITISAVVCVITTLSLSAISTNGEVKGGGVYFIISRSLGPEFGASVGVVFAFANAVSASMNTIGFC 239
            :.:..:...:||:|||||:|||.:||||.|::|.|:||||.|.|:|:.|...|||:.::..:|..
plant   171 VFLCGLCTFLTTISLSAIATNGAMKGGGPYYLIGRALGPEVGISIGLCFFLGNAVAGALYVLGAV 235

  Fly   240 ESL-----------NVLLKNNDLKIVDN----GINDIRIVGSITVLVLILICCVGMEWETKAQNF 289
            |:.           ..:.|.|...:.::    ..:|:::.|.:..::|..|...|::...:....
plant   236 ETFLKAFPAAGIFRETITKVNGTAVSESIQSPNSHDLQVYGIVVTILLCFIVFGGVKMINRVAPA 300

  Fly   290 LIVTIVLAIFNFLIGAAIGPQGNEEQISRGFVGFSWATLKENFGSDYRYAE---------GVNHD 345
            .:|.::|:||...||..:....:.:   .|..|....:.|:|:||.|:...         |....
plant   301 FLVPVLLSIFCIFIGIFLAKTDDPD---NGITGLRLKSFKDNWGSAYQMTNDAGIPDPTGGTYWS 362

  Fly   346 FFSVFAIFFPSVTGIQAGANICGDLKDAGAAIPKGTFWSLLISMSSYALFVLFAGGAAVRDASGI 410
            |..:..:|||:||||.||:|....|||...:||.||..:.|.:.|.|.:.|||.|..|.||    
plant   363 FNELVGLFFPAVTGIMAGSNRSASLKDTQKSIPVGTLAATLTTTSLYLISVLFFGAVATRD---- 423

  Fly   411 PADLVNGTIVSSELPCMATGNCTWGLFNSYEMMQEMSLWGPLIYAGCFAATLSTALTNLLSVPRL 475
                   .:::..|   .|....|.             :..:::.|...:||..||.:|...|||
plant   424 -------KLLTDRL---LTATIAWP-------------FPAIVHVGIILSTLGAALQSLTGAPRL 465

  Fly   476 VQALGIDQIYPGLIFFSKPYGKHGEPYRGYVLTFFITTGFLLIGELNLIAPLISTFYLASYALIN 540
            :.|:..|.|.|.|.:|.  .....||:...:.|.||..|.::||.|:||.|.::.|||..|:.:|
plant   466 LAAIANDDILPILNYFK--VADTSEPHIATLFTAFICIGCVVIGNLDLITPTVTMFYLLCYSGVN 528

  Fly   541 FCTFHAAFVKPLGWRPTFKYYNAWLSLFGFAMCVAIMFLINYVAAIITFGIIFALYLVVMYRKPE 605
            ...|....:....|||.:||::..||..|.::|:.|||||::...::...:...:|..|..:...
plant   529 LSCFLLDLLDAPSWRPRWKYHHWSLSFVGASLCIVIMFLISWSFTVVAIALASLIYKYVGLKGKA 593

  Fly   606 ANWGSTTQAQQYKAALMAVHRLQNVSDHVKNYHPQVLV-------LSGDPKTRPPLVDFGYLLTK 663
            .:||...::..::.||.::..|.....|.||::|..||       |..:....|.|.||...:.|
plant   594 GDWGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPLVFCRPWGQLPENVPCHPKLADFANCMKK 658

  Fly   664 NNSLMFVANIIPVRVG-YKNRQHLVKDGQK----YLDARKIKAFYNVIDGFSLEDGINALTKSTG 723
            ....|.:  .:.:..| |.......|:..|    |::.::.:....::...::.:|...:.::.|
plant   659 KGRGMSI--FVSILDGDYYECAEEAKEACKQLATYIEYKRCEGVAEIVVAPNMTEGFRGIIQTMG 721

  Fly   724 FGKMSPNIVLVGYKPDWNRCRKEEVESYF-SILYNAFSQRMGVALLRLPNGLDFSELSSEVTLPA 787
            .|.:.||||::.|...|.|....|:.|.| .|:.:..:....|.:::   |||            
plant   722 LGNLKPNIVVMRYPEIWRRENLTEIPSTFVGIINDCITANKAVVIIK---GLD------------ 771

  Fly   788 NGMGHMHTANAHGFTNELMPAANAASELLHIDSNLNLASMDSPNSSFTMPQPAPMPNMQRNSRSY 852
                                                    :.||               ...|.|
plant   772 ----------------------------------------EWPN---------------EYQRQY 781

  Fly   853 KVTSSDEPAVTYHTKGGSDIPQNLLDAMTIFTRKQPKGTIDVFWLYDDGGLTILLPYIISMRSHW 917
                                                 ||||::|:..||||.:||..::..:..:
plant   782 -------------------------------------GTIDLYWIVRDGGLMLLLSQLLLTKESF 809

  Fly   918 QNSKLRVFAMCHGKDEEQEEKSMASLLTKFRI---KYSELIML---------KGVSEQPRADTVL 970
            ::.|:::|.:.   :|:.:.:::.:.:.||..   .::|:|::         :|.|::...:...
plant   810 ESCKIQLFCIA---EEDSDAEALKADVKKFLYDLRMHAEVIVVTMKSWDIRSEGNSQEDSLEAFD 871

  Fly   971 KHKRLIEPF-----RRGAR-----------NEFGITDDELQSMSEKTNRQLRIHELVVKHSSNAS 1019
            ..:|.|..:     |:|:.           ||        |.:.:.....|:::..::.:|..|:
plant   872 AAQRRISDYLGEIKRQGSNPLLANGKPMVVNE--------QQVEKFLYTMLKLNSTILSYSRMAA 928

  Fly  1020 LVVMSLPMPRKEAISAP--LYMSWLEMLTSDMKCPVALARGNQTPVLTLYS 1068
            :|::|||.|   .::.|  .||.::::|..::. .:.:.||....|:||::
plant   929 VVLVSLPPP---PLNHPAYFYMEYMDLLVENVP-RMLIVRGYHRDVVTLFT 975

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NKCCNP_730938.1 2a30 85..1068 CDD:273347 249/1049 (24%)
DUF502 507..>643 CDD:294696 41/135 (30%)
SLC12 651..1068 CDD:281515 77/452 (17%)
CCC1NP_174333.2 2a30 56..975 CDD:273347 259/1089 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 278 1.000 Domainoid score I408
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57166
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11827
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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