DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NKCC and Slc12a2

DIOPT Version :9

Sequence 1:NP_730938.1 Gene:NKCC / 40663 FlyBaseID:FBgn0051547 Length:1068 Species:Drosophila melanogaster
Sequence 2:NP_113986.2 Gene:Slc12a2 / 83629 RGDID:620809 Length:1203 Species:Rattus norvegicus


Alignment Length:1138 Identity:456/1138 - (40%)
Similarity:665/1138 - (58%) Gaps:138/1138 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RFQISKVNGTANAGYDGEARSAESDQTDAA---HPLPPTSNENHLHPKASGETGENRRSSRLSFR 65
            ||:::.|:..|::       ||:...:|||   ...|..|.:|      .|:|..:..||..|..
  Rat   131 RFRVNFVDPAASS-------SADDSLSDAAGVGGDGPNVSFQN------GGDTVLSEGSSLHSGG 182

  Fly    66 GFGN-------------FLRKSDAERKFSLAQLTKESLPRLDNYRISM----RNLKRPSIGELQG 113
            |.|:             :||        :....|.:::||:|:||.:.    ..|.|||:.||..
  Rat   183 GSGHHQQYYYDTHTNTYYLR--------TFGHNTMDAVPRIDHYRHTAAQLGEKLLRPSLAELHD 239

  Fly   114 EAVDQSITIPEPEPEATG----------------------GHIKLGWIVGVLIPCLLNIWGVMLF 156
            |.        |.||...|                      |.:|.|||.|||:.|:|||||||||
  Rat   240 EL--------EKEPFEDGFANGEESTPTRDAVVTYTAESKGVVKFGWIKGVLVRCMLNIWGVMLF 296

  Fly   157 LRLSWVVAESGILQSLIIITISAVVCVITTLSLSAISTNGEVKGGGVYFIISRSLGPEFGASVGV 221
            :||||:|.::||..|:::|.::.||..||.||.|||:|||.|:|||.|::||||||||||.::|:
  Rat   297 IRLSWIVGQAGIGLSVLVIAMATVVTTITGLSTSAIATNGFVRGGGAYYLISRSLGPEFGGAIGL 361

  Fly   222 VFAFANAVSASMNTIGFCESLNVLLKNNDLKIVDNGINDIRIVGSITVLVLILICCVGMEWETKA 286
            :|||||||:.:|..:||.|::..|||.:.:.::|. ||||||:|:|||:||:.|...|||||.||
  Rat   362 IFAFANAVAVAMYVVGFAETVVELLKEHSILMIDE-INDIRIIGAITVVVLLGISVAGMEWEAKA 425

  Fly   287 QNFLIVTIVLAIFNFLIGAAIGPQGNEEQISRGFVGFSWATLKENFGSDYRYAEGVNHDFFSVFA 351
            |..|:|.::|||.:|:||..|.....:   .:||.|:......||||.|:|..|    .||||||
  Rat   426 QIVLLVILLLAIADFVIGTFISLDSKK---PKGFFGYKSEIFSENFGPDFREEE----TFFSVFA 483

  Fly   352 IFFPSVTGIQAGANICGDLKDAGAAIPKGTFWSLLISMSSYALFVLFAGGAAVRDASG-----IP 411
            ||||:.|||.|||||.|||.|..:||||||..::||:...|....:..|...||||:|     |.
  Rat   484 IFFPAATGILAGANISGDLADPQSAIPKGTLLAILITTVVYIGIAVSVGSCVVRDATGNVNDTIT 548

  Fly   412 ADLVNGTIVSSELP-----CMATGNCTWGLFNSYEMMQEMSLWGPLIYAGCFAATLSTALTNLLS 471
            .:|.|.|..:.:|.     | .:..|::||.|::::|..:|.:.|||.||.|:||||:||.:|:|
  Rat   549 TELTNCTSAACKLNFDFSYC-ESNTCSYGLMNNFQVMSMVSGFAPLISAGIFSATLSSALASLVS 612

  Fly   472 VPRLVQALGIDQIYPGLIFFSKPYGKHGEPYRGYVLTFFITTGFLLIGELNLIAPLISTFYLASY 536
            .|::.|||..|.|||....|:|.|||:.||.|||:|||.|..||:||.|||:|||:||.|:||||
  Rat   613 APKIFQALCKDNIYPAFQMFAKGYGKNNEPLRGYILTFLIALGFILIAELNVIAPIISNFFLASY 677

  Fly   537 ALINFCTFHAAFVKPLGWRPTFKYYNAWLSLFGFAMCVAIMFLINYVAAIITFGIIFALYLVVMY 601
            |||||..|||:..|..||||.|||||.|:||.|..:|..:||:||:.||::|:.|:..||:.|.|
  Rat   678 ALINFSVFHASLAKSPGWRPAFKYYNMWISLTGAILCCIVMFVINWWAALLTYVIVLGLYIYVTY 742

  Fly   602 RKPEANWGSTTQAQQYKAALMAVHRLQNVSDHVKNYHPQVLVLSGDPKTRPPLVDFGYLLTKNNS 666
            :||:.||||:|||..|.:||....||..|.|||||:.||.||::|.|.:||.|:...:..|||..
  Rat   743 KKPDVNWGSSTQALTYLSALQHSIRLSGVEDHVKNFRPQCLVMTGSPNSRPALLHLVHDFTKNVG 807

  Fly   667 LMFVANII--PVRVGYKNRQHLVKDGQKYLDARKIKAFYNVIDGFSLEDGINALTKSTGFGKMSP 729
            ||...::.  |.|...|.........|::|...|:||||..:....|.:|...|.::.|.|:|.|
  Rat   808 LMICGHVHMGPRRQAMKEMSIDQAKYQRWLIKNKMKAFYAPVHADDLREGAQYLMQAAGLGRMKP 872

  Fly   730 NIVLVGYKPDWNRCRKEEVESYFSILYNAFSQRMGVALLRLPNGLDFSELSSEVTLPANGMGHMH 794
            |.:::|:|.||.:....:|:.|.::.::||..:.||.::||..|||.|.|..:            
  Rat   873 NTLVLGFKKDWLQADMRDVDMYINLFHDAFDIQYGVVVIRLKEGLDISHLQGQ------------ 925

  Fly   795 TANAHGFTNELMPAANAASELLHIDSNLNLASMDSPNSSFTMPQPAPMPNMQRNSRSYKVTSSDE 859
                    .||:.:...:.....:..|::. |..|...:|......|:  .|::......||: :
  Rat   926 --------EELLSSQEKSPGTKDVVVNVDY-SKKSDQDAFKASGEKPI--TQKDEEEDGKTST-Q 978

  Fly   860 PAVTYHTKGG----SDIPQNLLDAMTIFTRKQPKGTIDVFWLYDDGGLTILLPYIISMRSHWQNS 920
            |.:...:||.    :...|.||:|.|.|.:||.|.||||:||:||||||:|:||:::.:..|::.
  Rat   979 PLLKKESKGPVAPLNVADQKLLEASTQFQKKQGKNTIDVWWLFDDGGLTLLIPYLLTTKKKWKDC 1043

  Fly   921 KLRVFAMCHGKDE--EQEEKSMASLLTKFRIKYSELIMLKGVSEQPRADTVLKHKRLIEPFRRGA 983
            |:|||  ..||..  :.:.::||:||:||||.:|::::|..::.:|:.:.::....:|||:|...
  Rat  1044 KIRVF--IGGKINRIDHDRRAMATLLSKFRIDFSDIMVLGDINTKPKKENIVAFDDMIEPYRLHE 1106

  Fly   984 RNE-------------FGITDDELQSMSEKTNRQLRIHELVVKHSSNASLVVMSLPMPRKEAISA 1035
            .::             :.|||:||:....||.||:|::||:.:|||.|:::|||||:.||.|:|:
  Rat  1107 DDKEQDIADKMKEDEPWRITDNELELYKTKTYRQIRLNELLKEHSSTANIIVMSLPVARKGAVSS 1171

  Fly  1036 PLYMSWLEMLTSDMKCPVALARGNQTPVLTLYS 1068
            .|||:|||.|:.|:. |:.|.|||...|||.||
  Rat  1172 ALYMAWLEALSKDLP-PILLVRGNHQSVLTFYS 1203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NKCCNP_730938.1 2a30 85..1068 CDD:273347 433/1039 (42%)
DUF502 507..>643 CDD:294696 78/135 (58%)
SLC12 651..1068 CDD:281515 143/437 (33%)
Slc12a2NP_113986.2 2a30 207..1203 CDD:273347 433/1039 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2083
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57166
OrthoDB 1 1.010 - - D135130at33208
OrthoFinder 1 1.000 - - FOG0001536
OrthoInspector 1 1.000 - - mtm8955
orthoMCL 1 0.900 - - OOG6_101360
Panther 1 1.100 - - O PTHR11827
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.790

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