DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NKCC and slc12a10.2

DIOPT Version :9

Sequence 1:NP_730938.1 Gene:NKCC / 40663 FlyBaseID:FBgn0051547 Length:1068 Species:Drosophila melanogaster
Sequence 2:NP_001038466.1 Gene:slc12a10.2 / 562834 ZFINID:ZDB-GENE-060503-425 Length:998 Species:Danio rerio


Alignment Length:1066 Identity:409/1066 - (38%)
Similarity:596/1066 - (55%) Gaps:135/1066 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GENRRSSRLSFR-------GFGNFLRKSDAERKFSLAQLTKESLPRLDNY-------RISMRNLK 104
            |..||.|.:..:       |..:|.:|.:  :|.|:.. ..:.:|:.|.|       ||..   .
Zfish    14 GMRRRDSNVPHQGDVAVDMGEADFGKKEN--QKMSIYN-PLDPVPKYDFYAKDTWAGRIKK---S 72

  Fly   105 RPSIGELQGEAVDQSITIPEPEPEATGGHIKL---GWIVGVLIPCLLNIWGVMLFLRLSWVVAES 166
            |||:..|:....|  || |.|:.|.....:||   ||::||.|.|:||||||:::|||.||.:::
Zfish    73 RPSLDVLRNPPDD--IT-PTPDEEDGRPKVKLVRFGWVLGVWIRCMLNIWGVIMYLRLPWVTSQA 134

  Fly   167 GILQSLIIITISAVVCVITTLSLSAISTNGEVKGGGVYFIISRSLGPEFGASVGVVFAFANAVSA 231
            |::.:.:||.:|..:..||..|:|||||||:|..||.||:||||||||.||.:|::||||.:::.
Zfish   135 GLVLTFVIIFMSVTITTITATSVSAISTNGKVYSGGTYFMISRSLGPELGAPIGLLFAFACSIAC 199

  Fly   232 SMNTIGFCESLNVLLKNNDLKIVDNGINDIRIVGSITVLVLILICCVGMEWETKAQNFLIVTIVL 296
            :::|:||.|::..:||:...::||: :||:||:|:|||.:.:||...||.||.|||....:.|:|
Zfish   200 ALHTVGFSETVRDMLKDFKSQMVDD-VNDVRIIGAITVTICLLITFAGMAWEAKAQILFFIAIIL 263

  Fly   297 AIFNFLIGAAIGPQGNEEQISRGFVGFSWATLKENFGSDYRYAEGVNHDFFSVFAIFFPSVTGIQ 361
            ::.|:.:|..|.|...:|.:  ||.|:.......|....:|   |.:..|..|||||||:.|||.
Zfish   264 SLLNYFVGTVIPPTQEKEAV--GFFGYHSDIFVSNLLPSFR---GPSGSFLVVFAIFFPACTGIL 323

  Fly   362 AGANICGDLKDAGAAIPKGTFWSLLISMSSYALFVLFAGGAAVRDASGIPAD---LVNGTIVSSE 423
            :|.||||||||....|||||..|:|.:..||.|.........||||||...|   :.|.||..|.
Zfish   324 SGVNICGDLKDPTGGIPKGTLLSILCTTLSYLLIAATCAATVVRDASGNKNDSLAISNYTIHCSG 388

  Fly   424 L---------PCMATGNCTWGLFNSYEMMQEMSLWGPLIYAGCFAATLSTALTNLLSVPRLVQAL 479
            |         .|....|||.||.|:..::..:|.||.||..|.||||||:||..|:|.|::.|.|
Zfish   389 LGCKYGWNFDSCEQYRNCTQGLANNLRILTVVSGWGILITIGTFAATLSSALGFLVSAPKVFQLL 453

  Fly   480 GIDQIYPGLIFFSKPYGKHGEPYRGYVLTFFITTGFLLIGELNLIAPLISTFYLASYALINFCTF 544
            ..|:|||.:.||.|.|||:.||.|.|||||.|...|:|||.||.||||||.|:||||.||||..|
Zfish   454 CKDKIYPYIGFFGKGYGKNKEPLRAYVLTFIIAMCFILIGNLNTIAPLISNFFLASYGLINFSCF 518

  Fly   545 HAAFVKPLGWRPTFKYYNAWLSLFGFAMCVAIMFLINYVAAIITFGIIFALYLVVMYRKPEANWG 609
            ||:..|..||||.::||:.|||||...:...:|||..:.||::||.::..|...|.|:|...|||
Zfish   519 HASITKSPGWRPQYRYYSPWLSLFCCCLSFTLMFLFTWWAALVTFSVVLFLIGYVNYKKTYVNWG 583

  Fly   610 STTQAQQYKAALMAVHRLQNVSDHVKNYHPQVLVLSGDPKTRPPLVDFGYLLTKNNSLMFVANI- 673
            |:.||..|..||.....|..|.|||||:.||.|||||.|.|||.||||....|||.|||...|| 
Zfish   584 SSYQAAFYNMALNFSMNLTTVPDHVKNFRPQCLVLSGPPNTRPALVDFVGTFTKNVSLMICGNIT 648

  Fly   674 -------IPVRVGYKNRQHLVKDGQKYLDARKIKAFYNVIDGFSLEDGINALTKSTGFGKMSPNI 731
                   .|     ::...||.:   :|..||:::||......||:||.:.|..::|.||:.||.
Zfish   649 IEGEQSDFP-----EHSSDLVVE---WLTKRKVRSFYTTFAAESLQDGAHNLMLASGLGKLKPNT 705

  Fly   732 VLVGYKPDWNRCRKEEVESYFSILYNAFSQRMGVALLRLPNGLDFSELSSEVTLPANGMGHMHTA 796
            :::|||.:|..|:.|.::.|.:.:.:||....||||||:.:.||                     
Zfish   706 LVLGYKTNWQECKPESLQDYINTINDAFDSNYGVALLRMMDKLD--------------------- 749

  Fly   797 NAHGFTNELMPAANAASELLHIDSNLNLASMDSPNSSF---TMPQPAPMPNMQRNSRSYKVTSSD 858
                .|:::..|.:            .|:::|:|  :|   .:|| :....:.|:|.:....|||
Zfish   750 ----ITDDMYSAED------------GLSAIDNP--AFERDEVPQ-SRSDTIDRDSDNSDEESSD 795

  Fly   859 EPAVTYHTKGGSDIPQNLLDAMTIFTRKQPKGTIDVFWLYDDGGLTILLPYIISMRSHWQNSKLR 923
            :                   ..|:|..||.|.|||::|:.||||||:|:||:::.|:.|:.||:|
Zfish   796 Q-------------------IRTVFQAKQGKKTIDIYWISDDGGLTLLVPYLLTRRNRWKKSKIR 841

  Fly   924 VFAMCHGKDEEQEEKSMASLLTKFRIKYSELIMLKGVSEQPRADTVLKHKRLIEPFRRGAR---- 984
            ||.:...:.::::...|..||.:||::..|:|::..|.:.|.|..|.:.:..|.|||....    
Zfish   842 VFILGDQETKKEDRDDMKMLLKRFRLEIEEVIVITDVDKPPLAKNVQRFEDTITPFRLSEEQTRV 906

  Fly   985 --------NEFGITDDELQSMSEKTNRQLRIHELVVKHSSNASLVVMSLPMPRKEAISAPLYMSW 1041
                    |.:.::|.:|:::..|..|.:|::|::.|:|..|:|||:|||:|.....|: |||:|
Zfish   907 DLQEFRRLNPWAVSDKDLEAVRPKVERTVRLNEIIKKNSLYAALVVVSLPVPDLNCPSS-LYMAW 970

  Fly  1042 LEMLTSDMKCPVALARGNQTPVLTLY 1067
            ::.|:..:.||..|.||||..|:|.|
Zfish   971 MDALSIGINCPALLIRGNQENVMTFY 996

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NKCCNP_730938.1 2a30 85..1068 CDD:273347 400/1028 (39%)
DUF502 507..>643 CDD:294696 69/135 (51%)
SLC12 651..1068 CDD:281515 135/440 (31%)
slc12a10.2NP_001038466.1 AA_permease_N 48..98 CDD:285588 15/56 (27%)
2a30 49..997 CDD:273347 400/1029 (39%)
SLC5-6-like_sbd 125..556 CDD:294310 203/436 (47%)
SLC12 625..997 CDD:281515 135/440 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2083
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 817 1.000 Inparanoid score I458
OMA 1 1.010 - - QHG57166
OrthoDB 1 1.010 - - D135130at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6412
orthoMCL 1 0.900 - - OOG6_101360
Panther 1 1.100 - - O PTHR11827
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.840

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