DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NKCC and slc12a10.3

DIOPT Version :9

Sequence 1:NP_730938.1 Gene:NKCC / 40663 FlyBaseID:FBgn0051547 Length:1068 Species:Drosophila melanogaster
Sequence 2:XP_021333240.1 Gene:slc12a10.3 / 562763 ZFINID:ZDB-GENE-060503-518 Length:1001 Species:Danio rerio


Alignment Length:1044 Identity:392/1044 - (37%)
Similarity:589/1044 - (56%) Gaps:132/1044 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 LRKSDAERKFSLAQLTKESLPRLDNY-------RISMRNLKRPSIGELQGEAVDQSITIPEPE-- 126
            :.:...:||.|:.. ..:..|:.:.|       ||..   .|||:..|:..        |:|:  
Zfish    41 MEQEQDKRKMSIFN-PLDPTPKFEFYAKDTWTGRIKS---ARPSLDVLRKS--------PDPDDL 93

  Fly   127 ---PEATGGH----IKLGWIVGVLIPCLLNIWGVMLFLRLSWVVAESGILQSLIIITISAVVCVI 184
               ||..|..    ::.||::||:|.|:||||||::||||.|:.:::||:.:.:||.:|..:..|
Zfish    94 PPPPEDDGRPKVKLVRFGWVLGVMIRCMLNIWGVIMFLRLPWITSQAGIILTYVIIFMSVTITTI 158

  Fly   185 TTLSLSAISTNGEVKGGGVYFIISRSLGPEFGASVGVVFAFANAVSASMNTIGFCESLNVLLKNN 249
            |..|:|||||||:|..||.||:||||||||.||.:|::|:||||::.|:||:||.|::..:||.|
Zfish   159 TATSVSAISTNGKVYSGGTYFLISRSLGPELGAPIGLLFSFANALACSLNTVGFAETVRDVLKEN 223

  Fly   250 DLKIVDNGINDIRIVGSITVLVLILICCVGMEWETKAQNFLIVTIVLAIFNFLIGAAIGPQGNEE 314
            :.::||: :||:||:|:|||.:|:||...||.||.|||....:.:::::.|:.:|..:.|...::
Zfish   224 NAQMVDD-VNDVRIIGTITVCILLLITFAGMAWEAKAQILFFIALLISLANYFVGTLLPPTPEKQ 287

  Fly   315 QISRGFVGFSWATLKENFGSDYRYAEGVNHDFFSVFAIFFPSVTGIQAGANICGDLKDAGAAIPK 379
            .:  ||.|:......:|....:|..:|   .||.:|:|||||.|||.:|.||||||||....|||
Zfish   288 AV--GFFGYRAEIFVDNLLPSFRGKDG---SFFRMFSIFFPSATGILSGVNICGDLKDPSGGIPK 347

  Fly   380 GTFWSLLISMSSYALFVLFAGGAAVRDASGIPADLVNGTIVSSELPCMATG-------------- 430
            ||..::..:..||.|..:....:.||||||   :|.:...:.|.:.|...|              
Zfish   348 GTLLAIFWTTVSYLLIAITVAASVVRDASG---NLNDSLALDSSIQCSGLGCKLGWNFDHCEQNH 409

  Fly   431 NCTWGLFNSYEMMQEMSLWGPLIYAGCFAATLSTALTNLLSVPRLVQALGIDQIYPGLIFFSKPY 495
            .|::||.|.::::...|..|.||..|.||||||:||..|:|.|::.|.|..|.|||.:.||.|.|
Zfish   410 TCSFGLANYFQILTTASGTGHLITIGIFAATLSSALGFLVSAPKIFQCLCKDNIYPYIGFFGKGY 474

  Fly   496 GKHGEPYRGYVLTFFITTGFLLIGELNLIAPLISTFYLASYALINFCTFHAAFVKPLGWRPTFKY 560
            ||:.||.|||:|.|||...|:|||:||.||||||.|:|.||.||||..|||...|..||||.:.|
Zfish   475 GKNQEPLRGYLLMFFIALAFILIGDLNTIAPLISNFFLCSYGLINFSCFHATITKSPGWRPHYHY 539

  Fly   561 YNAWLSLFGFAMCVAIMFLINYVAAIITFGIIFALYLVVMYRKPEANWGSTTQAQQYKAALMAVH 625
            ::.|.|||...:...:|||..:.||::||.|:.:|...|.|:||:.|||::.||..|..||....
Zfish   540 FSPWTSLFAAFLSFILMFLFTWWAALVTFAIVLSLLGYVTYKKPKINWGTSYQASFYNMALSFSM 604

  Fly   626 RLQNVSDHVKNYHPQVLVLSGDPKTRPPLVDFGYLLTKNNSLMFVANIIPVRVGYKNRQHLVKDG 690
            .|..|.|||||:.||.|||:|.|..||.||||....|||.|||...||..|....:..||.....
Zfish   605 SLTGVEDHVKNFRPQCLVLTGPPNVRPALVDFVGTFTKNISLMICGNIFMVEEKSRFPQHSTDML 669

  Fly   691 QKYLDARKIKAFYNVIDGFSLEDGINALTKSTGFGKMSPNIVLVGYKPDWNRCRKEEVESYFSIL 755
            ..:|:.||::|||......||.:|.::|.:::|.||:.||.:::|||.:|..|:.|.::.||:.:
Zfish   670 VDWLNQRKVRAFYTSFTADSLTEGTHSLMQASGLGKLKPNTLVLGYKTNWQECKPERLQDYFNTI 734

  Fly   756 YNAFSQRMGVALLRLPNGLDFSE-----LSSEVTLPANGMGHMHTANAHGFTNELMPAANAASEL 815
            .:||....|:|:||:.:|||..|     .||.:..||             |..:    .|..||.
Zfish   735 SDAFDSSYGIAVLRMMDGLDIREDLTSGRSSAIDNPA-------------FEAD----ENTKSEN 782

  Fly   816 LHIDSNLNLASMDSPNSSFTMPQPAPMPNMQRNSRSYKVTSSDEPAVTYHTKGGSDIPQNLLDAM 880
            ...|.|.::                                ||:        |.:|      ...
Zfish   783 EETDRNSDI--------------------------------SDD--------GSND------QVK 801

  Fly   881 TIFTRKQPKGTIDVFWLYDDGGLTILLPYIISMRSHWQNSKLRVFAMCHGKDEEQEEKSMASLLT 945
            |:|..||.:.|||::|:.||||||:|:||:::.|:.|:.||:|||.:...:..:::.|.|..||.
Zfish   802 TVFQTKQGRKTIDIYWISDDGGLTLLVPYLLTRRNRWKKSKIRVFVLGDQETMQEDHKDMKMLLK 866

  Fly   946 KFRIKYSELIMLKGVSEQPRADTVLKHKRLIEPFR------RGARNEF------GITDDELQSMS 998
            :||::..::|::..|.:.|.|..:.::...:.|||      ||...||      .::|.:|:::.
Zfish   867 RFRLEIEDIIVITDVDKPPLAKNLQRYDDSVAPFRLTEEQSRGDLQEFRRLNPWTVSDKDLEAIR 931

  Fly   999 EKTNRQLRIHELVVKHSSNASLVVMSLPMPRKEAISAPLYMSWLEMLTSDMKCPVALARGNQTPV 1063
            .|..|.:|::|::.|:|::|:|||:|||:|.....|: |||:|:|.|:..:.||..|.||||..|
Zfish   932 PKIERTVRLNEIIKKNSNHAALVVVSLPVPDLNCPSS-LYMAWMEALSFGIHCPALLIRGNQENV 995

  Fly  1064 LTLY 1067
            :|.|
Zfish   996 MTFY 999

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NKCCNP_730938.1 2a30 85..1068 CDD:273347 389/1030 (38%)
DUF502 507..>643 CDD:294696 67/135 (50%)
SLC12 651..1068 CDD:281515 138/434 (32%)
slc12a10.3XP_021333240.1 SLC12 54..1000 CDD:332077 389/1031 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2083
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 817 1.000 Inparanoid score I458
OMA 1 1.010 - - QHG57166
OrthoDB 1 1.010 - - D135130at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6412
orthoMCL 1 0.900 - - OOG6_101360
Panther 1 1.100 - - O PTHR11827
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.840

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