DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NKCC and kcc

DIOPT Version :9

Sequence 1:NP_730938.1 Gene:NKCC / 40663 FlyBaseID:FBgn0051547 Length:1068 Species:Drosophila melanogaster
Sequence 2:NP_001286795.1 Gene:kcc / 37800 FlyBaseID:FBgn0261794 Length:1077 Species:Drosophila melanogaster


Alignment Length:1238 Identity:286/1238 - (23%)
Similarity:492/1238 - (39%) Gaps:352/1238 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EARSAESDQTDAAHPLPPTSNENHLHPKASGETGENRRSSRLSFRGFGNFLRKSDAERKFSLAQL 85
            ::.||:.|..:.  .:.|:.:...:|...:.::|:..|:..         .:||..:....|...
  Fly     2 QSNSAKDDSDEM--EIIPSEHNGTVHETKNEDSGDIHRAEE---------NQKSSIDPNLYLYDD 55

  Fly    86 TKESLPRLDNYRISMRNLKRPSIGELQGEAVDQSITIP---EPEPEATGGHIKLGWIVGVLIPCL 147
            ..|:.|.:..:..|:.|.:.               |||   :|:.:......::|.::||.:||:
  Fly    56 DLETRPHISTFISSIANYEN---------------TIPAATDPDAKPAAPSARMGTLIGVFLPCI 105

  Fly   148 LNIWGVMLFLRLSWVVAESGILQSLIIITISAVVCVITTLSLSAISTNGEVKGGGVYFIISRSLG 212
            .||:||:||:||:|||..:|.:...:|:.....|.::|.:|:|||:|||.|..||.||:||||||
  Fly   106 QNIFGVILFIRLTWVVGTAGAVCGFLIVLTCCCVTMLTAISMSAIATNGVVPAGGSYFMISRSLG 170

  Fly   213 PEFGASVGVVFAFANAVSASMNTIGFCESLNVLLK------NNDLKIVDNGINDIRIVGSITVLV 271
            ||||.:||::|.....::|:|..:|..|.:...:.      .:..|..|...|:.|:.|::.::.
  Fly   171 PEFGGAVGMLFYTGTTLAAAMYIVGAVEIVLTYMAPWASIFGDFTKDADAMYNNFRVYGTLLLIF 235

  Fly   272 LILICCVGMEWETKAQNFLIVTIVLAIFNFLIGAAIGPQGNEEQIS------------------- 317
            :.||..:|:::..|.....:..::|:|....:|......|||:...                   
  Fly   236 MGLIVFLGVKFVNKFATVALACVILSIIAVYVGIFDNIHGNEKLYMCVLGKRLLKDIPLENCTKE 300

  Fly   318 --------------------------RGFVGFSWATLKENF------------------------ 332
                                      :|..|.:.....:|.                        
  Fly   301 DSFLRDIYCPDGKCEEYYLANNVTKVKGIKGLASGVFYDNIFPSFLEKGQFISYGKSAIDIENTS 365

  Fly   333 GSDY-RYAEGVNHDFFSVFAIFFPSVTGIQAGANICGDLKDAGAAIPKGTFWSLLISMSSYALFV 396
            |..| :....:...|..:..|||||||||.||:|..|||.||..:||.||..::|.:.:.|...|
  Fly   366 GESYNQIMADITTSFTLLIGIFFPSVTGIMAGSNRSGDLADAQKSIPIGTICAILTTSTVYLSSV 430

  Fly   397 LFAGGAA----VRDASGIPADLVNGTIVSSELPCMATGNCTWGLFNSYEMMQEMSLWGPLIYAGC 457
            :|..|..    :||..|   ..:.|.:|        ..|..|           .:.|  :|..|.
  Fly   431 MFFAGTVDNLLLRDKFG---QSIGGKLV--------VANIAW-----------PNQW--VILIGS 471

  Fly   458 FAATLSTALTNLLSVPRLVQALGIDQIYPGLIFFSKPYGKHGEPYRGYVLTFFITTGFLLIGELN 522
            |.:||...|.:|...|||:||:..|:|.|.|..|:|. .|.|||.|..:||..|....:|:|.::
  Fly   472 FLSTLGAGLQSLTGAPRLLQAIARDEIIPFLAPFAKS-SKRGEPTRALLLTIVICQCGILLGNVD 535

  Fly   523 LIAPLISTFYLASYALINFCTFHAAFVKPLGWRPTFKYYNAWLSLFGFAMCVAIMFLINYVAAII 587
            |:|||:|.|:|..|..:|........::...|||.||:|:..|||.|..:|:::|.:.::..|:|
  Fly   536 LLAPLLSMFFLMCYGFVNLACAVQTLLRTPNWRPRFKFYHWSLSLIGLTLCISVMIMTSWYFALI 600

  Fly   588 TFGIIFALYLVVMYRKPEANWGSTTQAQQYKAALMAVHRLQNVSDHVKNYHPQVLVLS--GD--- 647
            ..|:...:|..:.||..|..||...:.....||..::.||:....|.||:.||:||||  .|   
  Fly   601 AMGMAIIIYKYIEYRGAEKEWGDGIRGMALTAARYSLLRLEEGPPHTKNWRPQILVLSKLNDNLL 665

  Fly   648 PKTRPPLVDFGYLLTKNNSLMFVANIIPVRVGYKNRQHLVKDG----QKYLDARKIKAFYNVIDG 708
            ||.| .:..|...|.....|....::|  :..:....:...|.    :||:...|:|.|.:|:..
  Fly   666 PKYR-KIFSFATQLKAGKGLTICVSVI--KGDHTKITNKAVDAKATLRKYMTDEKVKGFCDVLVA 727

  Fly   709 FSLEDGINALTKSTGFGKMSPNIVLVGYKPDWNRCRKEEVESYFSILYNAFSQRMGVALLRLPNG 773
            ..:.:|::::.::.|.|.|.||.|::|:...|.:..:...:::...:....:..|.   |.:|.|
  Fly   728 QQIGEGLSSVIQTIGLGGMKPNTVIIGWPYSWRQEGRNSWKTFIQTVRTVAACHMA---LMVPKG 789

  Fly   774 LDFSELSSEVTLPANGMGHMHTANAHGFTNELMPAANAASELLHIDSNLNLASMDSPNSSFTMPQ 838
            ::|                             .|.:|                            
  Fly   790 INF-----------------------------YPESN---------------------------- 797

  Fly   839 PAPMPNMQRNSRSYKVTSSDEPAVTYHTKGGSDIPQNLLDAMTIFTRKQPKGTIDVFWLYDDGGL 903
                                      |..||:                     ||::|:..||||
  Fly   798 --------------------------HKIGGN---------------------IDIWWIVHDGGL 815

  Fly   904 TILLPYIISMRSHWQNSKLRVFAMCHGKDEE-QEEKSMASLLTKFRIK----------------- 950
            .:|||:::.....|:|.|||:|.:...:|.. |.:|.:.:.|...||:                 
  Fly   816 LMLLPFLLKQHRTWRNCKLRIFTVAQIEDNSIQMKKDLKTFLYHLRIEADVEVVEMNNSDISAYT 880

  Fly   951 YSELIMLKGVSEQPRA------------DTVLKHK----------------------------RL 975
            |...:|::..::..||            .|::.:|                            |.
  Fly   881 YERTLMMEQRNQMLRALGLNKKENSKVVQTIMDYKETPSDNKMSLVQTIVDHHYDATKTASKVRF 945

  Fly   976 IEPFRRGARNEFGITDDELQSM-----------------SEKTNR-------------------- 1003
            .:|.....::.....|::..|:                 .|.|.:                    
  Fly   946 ADPTIEETQHHDSQNDEKRNSIDLDGPENADTPETTSNKDESTEKADGDFKSSVKPDEFNVRRMH 1010

  Fly  1004 -QLRIHELVVKHSSNASLVVMSLPMPRKE--AISAPLYMSWLEMLTSDMKCPVALARGNQTPVLT 1065
             .::::|::|:.|.:|.||:|:||.|.:|  |.....||.:||:||..:: .|.:.||....|:|
  Fly  1011 TAIKLNEVIVEKSQDAQLVIMNLPGPPREVRAERERNYMEFLEVLTEGLE-KVLMVRGGGREVIT 1074

  Fly  1066 LYS 1068
            :||
  Fly  1075 IYS 1077

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NKCCNP_730938.1 2a30 85..1068 CDD:273347 274/1172 (23%)
DUF502 507..>643 CDD:294696 44/135 (33%)
SLC12 651..1068 CDD:281515 88/518 (17%)
kccNP_001286795.1 2a30 49..1077 CDD:273347 275/1178 (23%)
SLC12 674..1077 CDD:281515 87/512 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2083
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D20017at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11827
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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