DRSC/TRiP Functional Genomics Resources

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Protein Alignment NKCC and Slc12a8

DIOPT Version :9

Sequence 1:NP_730938.1 Gene:NKCC / 40663 FlyBaseID:FBgn0051547 Length:1068 Species:Drosophila melanogaster
Sequence 2:NP_705889.2 Gene:Slc12a8 / 266733 RGDID:628730 Length:705 Species:Rattus norvegicus


Alignment Length:450 Identity:126/450 - (28%)
Similarity:227/450 - (50%) Gaps:70/450 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 ELQGEAVDQ-SITIPEP---------EPEATGGHIKLGWIVGVLIPCLLNIWGVMLFLRLSWVVA 164
            ||..||..| ::...:|         ||      :..|...||...|::||:||:||||..|:|.
  Rat     8 ELFHEAAQQGALARSQPWWKIQLFMWEP------VLFGTWDGVFTSCMINIFGVVLFLRTGWLVG 66

  Fly   165 ESGILQSLIIITISAVVCVITTLSLSAISTNGEVKGGGVYFIISRSLGPEFGASVGVVFAFANAV 229
            .:|:|..|::::...:|.:||.||...::.:|.:..||||.:||..||.:.|.:||:::.|...|
  Rat    67 NTGVLLGLLLVSFVILVALITVLSGIGVAEHGWMGSGGVYSMISSVLGGQMGGTVGLLYVFGQCV 131

  Fly   230 SASMNTIGFCESLNVLLKNNDLKIVDNGINDIRIVGSITVLVLILICCV---GMEWETKAQNFLI 291
            :.:|...||.||::.||          |:.:|..|..|:|.||:.:..:   |::|..:.|..|:
  Rat   132 AGAMYLTGFAESISDLL----------GLGNIWAVRGISVAVLLALLGINLAGVKWIIRLQLLLL 186

  Fly   292 VTIVLAIFNFLIGA--AIGPQGNEEQISRGFVGFSWATLKENFGSDYRYAEGVNHDFFSVFAIFF 354
            ..:.::..:|::|:  .:.|:       .||:|:|...|:.|...:|...|    .||:||.:||
  Rat   187 SLLAVSTLDFVVGSFTHLDPE-------HGFIGYSPELLQSNILPEYSPGE----SFFTVFGVFF 240

  Fly   355 PSVTGIQAGANICGDLKDAGAAIPKGTFWSLLISMSSYALFVLFAGGAAVRDASGIPADLVNGTI 419
            |:.||:.||.|:.|||::...:||.|:..::.||...|.:|....|....|:|            
  Rat   241 PAATGVMAGFNMGGDLREPADSIPLGSLAAVGISWFLYIIFAFLLGAVCTREA------------ 293

  Fly   420 VSSELPCMATGNCTWGLFNSYEMMQEMSLWGPLIYAGCFAATLSTALTNLLSVPRLVQALGIDQI 484
                            |.:.:.:.:::||.|.|...|.:.::|::.:..|...||::|.:..|::
  Rat   294 ----------------LRSDFLIAEKVSLVGFLFLLGLYISSLASCMGGLYGAPRILQCIAQDKV 342

  Fly   485 YPGLIFFSKPYGKHGEPYRGYVLTFFITTGFLLIGELNLIAPLISTFYLASYALINFCTF 544
            .|.|.|.....|.:..|.....||..:|..|:|:|::|::||:::..::.:|..:::..|
  Rat   343 IPALAFLGNGKGPNKTPVAAICLTSLVTMAFVLVGQVNVLAPVVTINFMLTYIAVDYSYF 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NKCCNP_730938.1 2a30 85..1068 CDD:273347 125/449 (28%)
DUF502 507..>643 CDD:294696 10/37 (27%)
SLC12 651..1068 CDD:281515
Slc12a8NP_705889.2 2a30 34..>420 CDD:273347 119/423 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2083
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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