DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NKCC and Slc12a3

DIOPT Version :9

Sequence 1:NP_730938.1 Gene:NKCC / 40663 FlyBaseID:FBgn0051547 Length:1068 Species:Drosophila melanogaster
Sequence 2:XP_017168114.1 Gene:Slc12a3 / 20497 MGIID:108114 Length:1009 Species:Mus musculus


Alignment Length:1103 Identity:414/1103 - (37%)
Similarity:597/1103 - (54%) Gaps:198/1103 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 PP----TSNENHLHPKASGETGENRRSSRLSFRGFG-NFLRKSDAERKFSLAQLTKESLPRLDNY 96
            ||    :|..:||           ...|.|..|.|| |.:....|...::.:.|..|  ||    
Mouse    31 PPAACDSSQPSHL-----------THGSTLYMRTFGYNTIDVVPAYEHYANSALPGE--PR---- 78

  Fly    97 RISMRNLKRPSIGEL-------------------QGEAV------DQSITIPEPEPEATGGHIKL 136
                  ..||::.:|                   ||..:      |::.|..|..|   |..::.
Mouse    79 ------KVRPTLADLHSFLKQEGSHLHALAFDGRQGRELTDGLVEDETGTNSEKSP---GEPVRF 134

  Fly   137 GWIVGVLIPCLLNIWGVMLFLRLSWVVAESGILQSLIIITISAVVCVITTLSLSAISTNGEVKGG 201
            ||:.||:|.|:||||||:|:|||.|:.|::||:.:.:||.:|.:|..||.||:|||||||:||.|
Mouse   135 GWVKGVMIRCMLNIWGVILYLRLPWITAQAGIVLTWLIILLSVMVTSITGLSISAISTNGKVKSG 199

  Fly   202 GVYFIISRSLGPEFGASVGVVFAFANAVSASMNTIGFCESLNVLL-------KNNDLKIVDNGIN 259
            |.||:||||||||.|.|:|::|||||||..:|:|:||.|::..||       :.....||| .||
Mouse   200 GTYFLISRSLGPELGGSIGLIFAFANAVGVAMHTVGFAETVRDLLQLACSPTQEYGTPIVD-PIN 263

  Fly   260 DIRIVGSITVLVLILICCVGMEWETKAQNFLIVTIVLAIFNFLIGAAIGPQGNEEQISRGFVGFS 324
            ||||:|.:||.||:.|...|||||:|||....:.|:::..|:|:|..|  ..:|::.|:||..:.
Mouse   264 DIRIIGVVTVTVLLAISLAGMEWESKAQVLFFLVIMVSFANYLVGTLI--PASEDKASKGFYSYH 326

  Fly   325 WATLKENFGSDYRYAEGVNHDFFSVFAIFFPSVTGIQAGANICGDLKDAGAAIPKGTFWSLLISM 389
            .....:|...|:|   |::..||.:|:|||||.|||.|||||.|||||...||||||..::..:.
Mouse   327 GDIFVQNLVPDWR---GIDGSFFGMFSIFFPSATGILAGANISGDLKDPAVAIPKGTLMAIFWTT 388

  Fly   390 SSYALFVLFAGGAAVRDASGIPADLVNGTIVSSELPC--MATG------------NCTWGLFNSY 440
            .||.......|...||||||.    ||.|:.....||  :|.|            :|.:||.|.|
Mouse   389 ISYLAISATIGSCVVRDASGD----VNDTMTPGPGPCEGLACGYGWNFTECSQQRSCRYGLINYY 449

  Fly   441 EMMQEMSLWGPLIYAGCFAATLSTALTNLLSVPRLVQALGIDQIYPGLIFFSKPYGKHGEPYRGY 505
            :.|..:|.:.|||.||.|.||||:||..|:|..::.|.|..||:||.:.||.|.|||:.||.|||
Mouse   450 QTMSMVSAFAPLITAGIFGATLSSALACLVSAAKVFQCLCEDQLYPLIGFFGKGYGKNREPVRGY 514

  Fly   506 VLTFFITTGFLLIGELNLIAPLISTFYLASYALINFCTFHAAFVKPLGWRPTFKYYNAWLSLFGF 570
            :|.:.|...|::|.|||.|||:||.|:|.|||||||..|||:.....||||:|:||:.|.:|||.
Mouse   515 LLAYAIAVAFIIIAELNTIAPIISNFFLCSYALINFSCFHASITNSPGWRPSFRYYSKWAALFGA 579

  Fly   571 AMCVAIMFLINYVAAIITFGIIFALYLVVMYRKPEANWGSTTQAQQYKAALMAVHRLQNVSDHVK 635
            .:.|.||||:.:.||:|..|::..|.|.|:|:|||.||||:.||..|..||.....|..|.||:|
Mouse   580 VISVVIMFLLTWWAALIAIGVVLFLLLYVIYKKPEVNWGSSVQAGSYNLALSYSVGLNEVEDHIK 644

  Fly   636 NYHPQVLVLSGDPKTRPPLVDFGYLLTKNNSLMFVANIIPVRVGYKNRQ----HLVKDGQ-KYLD 695
            ||.||.|||:|.|..||.||||....|:|.|||...:::   :|...::    .|:..|. |:|:
Mouse   645 NYRPQCLVLTGPPNFRPALVDFVSTFTQNLSLMICGHVL---IGPGKQRVPELRLIASGHTKWLN 706

  Fly   696 ARKIKAFYNVIDGFSLEDGINALTKSTGFGKMSPNIVLVGYKPDWNRCRKEEVESYFSILYNAFS 760
            .|||||||:.:....|..|:..|.:::|.|:|.|||::||:|.:|.......||.|..:|::||.
Mouse   707 KRKIKAFYSDVIAEDLRSGVQILMQASGLGRMKPNILVVGFKRNWQSAHPATVEDYIGVLHDAFD 771

  Fly   761 QRMGVALLRLPNGLDFSELSSEVTLPANGMGHMHTANAHGFTNELMPAANAASELLHIDSNLNLA 825
            ...||.::|:..||:.||                                               
Mouse   772 FNYGVCVMRMREGLNVSE----------------------------------------------- 789

  Fly   826 SMDSPNSSFTMPQPAPMPNMQRNSRSYKVTSSDEPAVTYHTKGGSDIPQNLL---DAMTIFTRKQ 887
                                               |:..||     .|:.|:   .|.|||..:|
Mouse   790 -----------------------------------ALQTHT-----TPEALIQEEQASTIFQSEQ 814

  Fly   888 PKGTIDVFWLYDDGGLTILLPYIISMRSHWQNSKLRVFAMCHGKDEEQEEKSMASLLTKFRIKYS 952
            .|.|||::||:||||||:|:||::..:..|...|:|||........::|.|::.|||:|||:.:.
Mouse   815 GKKTIDIYWLFDDGGLTLLIPYLLHRKKRWGKCKIRVFVGGQINRMDEERKAIISLLSKFRLGFH 879

  Fly   953 ELIMLKGVSEQPRADTVLKHKRLIEPFR--RGARNE-----------FGITDDELQSMSEKTNRQ 1004
            |:.:|..::::|:|:...:.:.:|.|||  .|.::|           :.|:|:|:.....|:.||
Mouse   880 EVHVLPDINQKPQAEHTKRFEDMIAPFRLNDGFKDEATVTEMRRDCPWKISDEEINKNRIKSLRQ 944

  Fly  1005 LRIHELVVKHSSNASLVVMSLPMPRKEAISAPLYMSWLEMLTSDMKCPVALARGNQTPVLTLY 1067
            :|:.|:::.:|.:|:|::::||:.||....:.|||:|||.|:.|::.||.|.||||..|||.|
Mouse   945 VRLSEILLDYSRDAALIILTLPIGRKGKCPSSLYMAWLETLSQDLRPPVLLIRGNQENVLTFY 1007

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NKCCNP_730938.1 2a30 85..1068 CDD:273347 402/1050 (38%)
DUF502 507..>643 CDD:294696 69/135 (51%)
SLC12 651..1068 CDD:281515 131/438 (30%)
Slc12a3XP_017168114.1 2a30 57..1008 CDD:273347 404/1066 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2083
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57166
OrthoDB 1 1.010 - - D135130at33208
OrthoFinder 1 1.000 - - FOG0001536
OrthoInspector 1 1.000 - - mtm8718
orthoMCL 1 0.900 - - OOG6_101360
Panther 1 1.100 - - O PTHR11827
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.790

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