DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NKCC and T04B8.5

DIOPT Version :9

Sequence 1:NP_730938.1 Gene:NKCC / 40663 FlyBaseID:FBgn0051547 Length:1068 Species:Drosophila melanogaster
Sequence 2:NP_001022305.1 Gene:T04B8.5 / 173453 WormBaseID:WBGene00020207 Length:952 Species:Caenorhabditis elegans


Alignment Length:1107 Identity:277/1107 - (25%)
Similarity:468/1107 - (42%) Gaps:218/1107 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ISKVNGTANAGYDGEARSAESDQTDAAHPLPPTSNENHLHPKASGETGENRRSSRLSFRGFGNFL 71
            ::...|..|..|||....||         :|                |||.:|.:          
 Worm    14 MTSYGGIVNEMYDGGGGDAE---------IP----------------GENGKSPK---------- 43

  Fly    72 RKSDAERKFSLAQLTKESLPRLDNYRISMRNLKRPSIGELQGEAVDQSITIPEPEPEATGGHIKL 136
                           |.::|.:|..  |....:..:.|:..|.:.....:...|     ||   |
 Worm    44 ---------------KGAVPLIDEE--SQSTPRGSTSGDGGGGSPSMEFSSSRP-----GG---L 83

  Fly   137 GWIVGVLIPCLLNIWGVMLFLRLSWVVAESGILQSLIIITISAVVCVITTLSLSAISTNGEVKGG 201
            ..|.||..|..|:::.::||||:.:||.:.|.|.:::.:.::..:.::|.|||.|||:||.|:||
 Worm    84 STISGVFAPVALSMFSILLFLRMGFVVGQLGFLMTILQLAMAYAIVMLTVLSLCAISSNGAVEGG 148

  Fly   202 GVYFIISRSLGPEFGASVGVVFAFANAVSASMNTIGFCESLNVLLKNNDLKIVDNG-INDI---R 262
            |||::||||||||||.::||:|..||..|.::...||.|:    |.||    :.|| ..|.   |
 Worm   149 GVYYMISRSLGPEFGGAIGVLFFVANVFSCALYISGFTEA----LMNN----IGNGQFPDSPAWR 205

  Fly   263 IVGSITV-LVLILICCVG--MEWETKAQNFLIVT------IVLAIFN----------------FL 302
            .|..:.| |||:::..:|  :..:|....|::::      ||..|||                .|
 Worm   206 FVYCVLVSLVLLVLSLLGSALFAKTALITFVLISVCYGTWIVSVIFNGRMEVLIPKVNTPAYRVL 270

  Fly   303 IGAAIGPQGNEEQ----ISRGFVGFSWATLKENFGSDYR--YAEGVNHDFFSVFAIFFPSVTGIQ 361
            :.|:...||..|.    ::..:.|:|:.||.||...:|.  |......||..:|||.|..|||:.
 Worm   271 VNASDPSQGTVEDFNQTLTANYTGWSFHTLGENMFPEYTMDYTTEKPTDFALMFAIIFSGVTGLM 335

  Fly   362 AGANICGDLKDAGAAIPKGTFWSLLISMSSYALFVLFAGGAAVRDASGIPADLVNGTIVSSELPC 426
            ||||:.|:|.....:||:||..::.:::..|.:....                            
 Worm   336 AGANMSGELARPSVSIPRGTVQAVFMTLFVYVMTAFL---------------------------- 372

  Fly   427 MATGNCTWGLFNSYEMMQEMSLWGPLIYAGCFAATLSTALTNLLSVPRLVQALGIDQIYPGLIFF 491
            |||.:..:.|.|.|.:|.:.:.....|..|.|:.||.::::||:...|::..|..|:::..|:..
 Worm   373 MATTSSRYLLQNDYTVMMDTNFHRVFILIGIFSTTLFSSMSNLIGSSRVLNRLSHDKLFGCLLRP 437

  Fly   492 SKPYGKHGEPYRGYVLTFFITTGFLLIGELNLIAPLISTFYLASYALINFCTFHAAFVKPLGWRP 556
            :|.......|....|:|:.......|:|.:|.||.|.|.|:|.||..:|..|..........:||
 Worm   438 AKIEIGDRNPVVSVVITWMCVVLVFLVGAMNKIAKLTSIFFLLSYMGVNVATLALELTSAPNFRP 502

  Fly   557 TFKYYNAWLSLFGFAMCVAIMFLINYVAAIITFGIIFALYLVVMYRKPEANWGSTTQAQQYKAAL 621
            ||||::......|......:|.:::...:.:...::.:|.:|:.|:.|..:.||.:||..|....
 Worm   503 TFKYFSWQTCALGVVATATMMLVVDASMSALGVVVLMSLIMVLHYQAPSVSSGSISQALIYHQVR 567

  Fly   622 MAVHRLQNVSDHVKNYHPQVLVLSGDPKTRPPLVDFGYLLTKNNSLMFVANIIPVRVGYKNRQHL 686
            ..:..|....:|||.:.||:|:|...|.:...|:||...| |.:.|..|.:   ||.|..:...:
 Worm   568 KYLLLLDVRKEHVKYWRPQILLLVSRPASACSLLDFVNDL-KKSGLYLVGH---VRKGEMDSSQV 628

  Fly   687 VKDGQK-------YLDARKIKAFYNVIDGFSLEDGINALTKSTGFGKMSPNIVLVGYKPDWNRCR 744
            |...|:       .:|..|:|||..:....::..||..|.:.:|.|.|.||.|::|:        
 Worm   629 VDPLQQVFPYWLSLIDYLKLKAFVELTMSNNIRHGIQQLMRLSGLGAMKPNTVVIGF-------- 685

  Fly   745 KEEVESYFSILYNAFSQRMGVALLRLPNGLDFSELSSEVTLPANGMGHMHTANAHGFTNELMPA- 808
                       :.....::.:...:|...|.||::.....:.....|........|....|.|. 
 Worm   686 -----------HELAPSQVTLQESQLLKDLRFSKIDRAAVVEYFTAGDYMPKELDGNLERLTPVD 739

  Fly   809 -ANAASELLHIDSNLNLASMDSPNSSFTMPQPAPMPNMQRNSRSYKVTSSDEPAVTYHTKGGSDI 872
             .|...::||:..||.:|                        |.:  :..|:.|:.....|    
 Worm   740 YVNVLKDVLHMTKNLCVA------------------------RHF--SKLDKEALARGWNG---- 774

  Fly   873 PQNLLDAMTIFTRKQPKGTIDVFWLYDDGGLTIL-LPYIISMRSHWQN-SKLRVFAMCHG-KDEE 934
            .:..:|...:..:| |:.| .:.|  |:..|.:| |..|:||.|.|:: :|||||...:. :|..
 Worm   775 QKRYIDVWPVDLQK-PQET-GLGW--DNSSLFLLQLSCILSMSSRWRSYTKLRVFICVNSLQDMH 835

  Fly   935 QEEKSMASLLTKFRIKYSELIMLKGVSEQPRADTVLKHKRLIEPFRRGARNEFGITDDELQSMSE 999
            :.|:.:.::|...||        :|.|.....|.|:.|   .:|     .|.....:....|:..
 Worm   836 RRERQLKNMLQTLRI--------EGESSVVPWDHVVCH---YQP-----PNATASANTATPSVDL 884

  Fly  1000 KTNRQLRIHELVVKHSSNASLVVMSLPMPRKEA-ISAPLYMSWLEMLTSDMKCPVALARGNQTPV 1063
            ........:::|.::|.:|::.:::||:|...| |.|..|:..:..|| |...|..|..|..:.:
 Worm   885 PPAYVSAFNDMVKRYSEDAAITLLNLPVPPDNADIDADRYLEMVRNLT-DALPPTLLVHGVSSVI 948

  Fly  1064 LT 1065
            .|
 Worm   949 ST 950

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NKCCNP_730938.1 2a30 85..1068 CDD:273347 265/1029 (26%)
DUF502 507..>643 CDD:294696 37/135 (27%)
SLC12 651..1068 CDD:281515 94/428 (22%)
T04B8.5NP_001022305.1 2a30 85..943 CDD:273347 253/967 (26%)
SLC12 593..943 CDD:281515 93/423 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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