DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NKCC and Slc12a6

DIOPT Version :10

Sequence 1:NP_730938.1 Gene:NKCC / 40663 FlyBaseID:FBgn0051547 Length:1068 Species:Drosophila melanogaster
Sequence 2:NP_598410.2 Gene:Slc12a6 / 107723 MGIID:2135960 Length:1150 Species:Mus musculus


Alignment Length:1241 Identity:311/1241 - (25%)
Similarity:519/1241 - (41%) Gaps:329/1241 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ISKVNGTANAGYDGEARSAESDQTDAAHPLPPTSNENHLHPKASGETGENRRSSRLSFRGFGNFL 71
            :|:::| |.......|....||:|.....:....::|.:..:.|....:..:.:|.::....|: 
Mouse    60 MSELSG-ATTSLATVALDPSSDRTSNPQDVTEDPSQNSITGEHSQLLDDGHKKARNAYLNNSNY- 122

  Fly    72 RKSDA--ERKFSLAQLTKESLPRLDNYRISMRNLKRPSIGELQGEAVDQSITIPEPEPEATGGHI 134
            .:.|.  ::..:|.:...::.|::.:....|.|....:.|..:.|.. ::||..:.:|..:.   
Mouse   123 EEGDEYFDKNLALFEEEMDTRPKVSSLLNRMANYTNLTQGAKEHEEA-ENITEGKKKPTKSP--- 183

  Fly   135 KLGWIVGVLIPCLLNIWGVMLFLRLSWVVAESGILQSLIIITISAVVCVITTLSLSAISTNGEVK 199
            ::|..:||.:|||.||:||:|||||:|||..:||||:..|:.|.....::|.:|:|||:|||.|.
Mouse   184 QMGTFMGVYLPCLQNIFGVILFLRLTWVVGTAGILQAFAIVLICCCCTMLTAISMSAIATNGVVP 248

  Fly   200 GGGVYFIISRSLGPEFGASVGVVFAFANAVSASMNTIGFCESLNV-------LLKNND-LKIVDN 256
            .||.||:|||:||||||.:||:.|......:|:|..:|..|...|       :.:::| ||....
Mouse   249 AGGSYFMISRALGPEFGGAVGLCFYLGTTFAAAMYILGAIEIFLVYIVPRAAIFRSDDALKESAA 313

  Fly   257 GINDIRIVGSITVLVLILICCVGMEWETK-AQNFL--IVTIVLAIFNFLIGAAIGPQ-------G 311
            .:|::|:.|:..:::::|:..:|:.:..| |..||  ::..:|||:...|.::..|.       |
Mouse   314 MLNNMRVYGTAFLVLMVLVVFIGVRYVNKFASLFLACVIVSILAIYAGAIKSSFAPPHFPVCMLG 378

  Fly   312 NEEQISR------------------------------------------------GFVGFSWATL 328
            |....||                                                |..|.:...:
Mouse   379 NRTLSSRHLDICSKTKEVDNMTVPSKLWGFFCNSSQFFNATCDEYFVHNNVISIQGIPGLASGII 443

  Fly   329 KENFGSDYRYAEG----------------VNHD---------FFSVFAIFFPSVTGIQAGANICG 368
            .||..|:| ..:|                :||:         |..:..|||||||||.||:|..|
Mouse   444 TENLWSNY-LPKGEIIEKPSAKSSDVLGNLNHEYVLADITTSFTLLVGIFFPSVTGIMAGSNRSG 507

  Fly   369 DLKDAGAAIPKGTFWSLL----ISMSSYALFVLFAGGAAVRDASGIPADLVNGTIVSSELPCMAT 429
            |||||..:||.||..::|    :.:|:..||.....|..:||..|   |.|.|.:|        .
Mouse   508 DLKDAQKSIPIGTILAILTTSFVYLSNVVLFGACIEGVVLRDKFG---DAVKGNLV--------V 561

  Fly   430 GNCTWGLFNSYEMMQEMSLWGPLIYAGCFAATLSTALTNLLSVPRLVQALGIDQIYPGLIFFSKP 494
            |..:|           .|.|  :|..|.|.:|....|.:|...|||:||:..|.|.|    |.:.
Mouse   562 GTLSW-----------PSPW--VIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIP----FLRV 609

  Fly   495 YG---KHGEPYRGYVLTFFITTGFLLIGELNLIAPLISTFYLASYALINFCTFHAAFVKPLGWRP 556
            :|   .:|||....:||..|....:||..|:|:||::|.|:|..|..:|........::...|||
Mouse   610 FGHSKANGEPTWALLLTAAIAELGILIASLDLVAPILSMFFLMCYLFVNLACALQTLLRTPNWRP 674

  Fly   557 TFKYYNAWLSLFGFAMCVAIMFLINYVAAIITFGIIFALYLVVMYRKPEANWGSTTQAQQYKAAL 621
            .|:||:..||..|.::|:|:||:.::..||:...|...:|..:.|:..|..||...:.....||.
Mouse   675 RFRYYHWALSFMGMSICLALMFISSWYYAIVAMVIAGMIYKYIEYQGAEKEWGDGIRGLSLSAAR 739

  Fly   622 MAVHRLQNVSDHVKNYHPQVLV---LSGDPKTR-PPLVDFGYLLTKNNSLMFVANIIPVRVG--- 679
            .|:.||:....|.||:.||:||   |..|...: |.|:.|...|.....|..|.::|   ||   
Mouse   740 FALLRLEEGPPHTKNWRPQLLVLLKLDEDLHVKHPRLLTFASQLKAGKGLTIVGSVI---VGNFL 801

  Fly   680 --YKNRQHLVKDGQKYLDARKIKAFYNVIDGFSLEDGINALTKSTGFGKMSPNIVLVGYKPDWNR 742
              |.:.....:..:..::|.|:|.|..::....|::||:.|.:|.|.|.|..|.|::|:...|  
Mouse   802 ENYGDALAAEQTIKHLMEAEKVKGFCQLVVAAKLKEGISHLIQSCGLGGMKHNTVVMGWPNGW-- 864

  Fly   743 CRKEEVESYFSILYNAFSQRMGVALLRLPNGLDFSELSSEVTLPANGMGHMHTANAHGFTNELMP 807
             |:.|         :|.:.:..:..:|:                        |..||        
Mouse   865 -RQSE---------DARAWKTFIGTVRV------------------------TTAAH-------- 887

  Fly   808 AANAASELLHIDSNLNLASMDSPNSSFTMPQPAPMPNMQRNSRSYKVTSSDEPAVTYHTKGGSDI 872
                            ||.:.:.|.||                                     .
Mouse   888 ----------------LALLVAKNVSF-------------------------------------F 899

  Fly   873 PQNLLDAMTIFTRKQPKGTIDVFWLYDDGGLTILLPYIISMRSHWQNSKLRVFAMCHGKDEE-QE 936
            |.|:        .:..:|.|||:|:..|||:.:|||:::.....|:...:|:|.:...:|.. |.
Mouse   900 PSNV--------EQFSEGNIDVWWIVHDGGMLMLLPFLLKQHKVWRKCSIRIFTVAQLEDNSIQM 956

  Fly   937 EKSMASLLTKFRIK-----------------YSELIMLKGVSEQPRADTVLKHKRLIEPFR-RGA 983
            :|.:|:.|...||:                 |...:|::..|:      :|:|.||.:..| |.|
Mouse   957 KKDLATFLYHLRIEAEVEVVEMHDSDISAYTYERTLMMEQRSQ------MLRHMRLSKTERDREA 1015

  Fly   984 -----RNEF-------GITDDELQSMSEKT----------------------------------- 1001
                 ||..       ...|:|.::..||.                                   
Mouse  1016 QLVKDRNSMLRLTSIGSDEDEETETYQEKVHMTWTKDKYMASRGQKVKSMEGFQDLLNMRPDQSN 1080

  Fly  1002 ----NRQLRIHELVVKHSSNASLVVMSLPMPRKEAISAPLYMSWLEMLTSDMKCPVALARGNQTP 1062
                :..::::|::|..|..|.||::::|.|.:.......||.:||:||..:: .|.|.||..:.
Mouse  1081 VRRMHTAVKLNEVIVNKSHEAKLVLLNMPGPPRNPEGDENYMEFLEVLTEGLE-RVLLVRGGGSE 1144

  Fly  1063 VLTLYS 1068
            |:|:||
Mouse  1145 VITIYS 1150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NKCCNP_730938.1 AA_permease_2 85..1068 CDD:459263 296/1159 (26%)
Slc12a6NP_598410.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..108 9/48 (19%)
2a30 109..1150 CDD:273347 300/1189 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 161..181 5/20 (25%)
Scissor helix. /evidence=ECO:0000250|UniProtKB:Q9UHW9 682..691 3/8 (38%)

Return to query results.
Submit another query.