DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NKCC and slc12a1

DIOPT Version :9

Sequence 1:NP_730938.1 Gene:NKCC / 40663 FlyBaseID:FBgn0051547 Length:1068 Species:Drosophila melanogaster
Sequence 2:XP_002936613.2 Gene:slc12a1 / 100490198 XenbaseID:XB-GENE-479925 Length:1086 Species:Xenopus tropicalis


Alignment Length:1146 Identity:457/1146 - (39%)
Similarity:656/1146 - (57%) Gaps:158/1146 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RFQISKVNGTANAGYDGEARSAESDQTDAAHPLPPTSNENHLHPKASGETGENRRSSRLSFRG-F 67
            |||::.|    ..|||..|    .:..|     ||...|...       ..:||.|.|...|. |
 Frog    18 RFQVNVV----GEGYDNPA----CEDKD-----PPDYEETSF-------ADDNRMSYRPGNREIF 62

  Fly    68 GNFLRKSD---AERKF-------------SLAQLTKESLPRLDNYR----ISMRNLKRPSIGELQ 112
            .|.|...|   .|..|             :....|.:::|::|.||    ||...:.|||:.::.
 Frog    63 NNVLHNGDTIKTEGSFHPYDTHGHAYYMKTFGHNTVDAVPKIDYYRNTGSISGVKICRPSLADIH 127

  Fly   113 GEAVDQSITIP---------------EPEPEATGGHIKLGWIVGVLIPCLLNIWGVMLFLRLSWV 162
            .:.....:.:|               ..|....||.:|.|||.|||:.|:|||||||||:||||:
 Frog   128 EQLSKNVVEVPGSVTNGEGIPGDEEANKEEGEKGGFVKFGWIKGVLVRCMLNIWGVMLFIRLSWI 192

  Fly   163 VAESGILQSLIIITISAVVCVITTLSLSAISTNGEVKGGGVYFIISRSLGPEFGASVGVVFAFAN 227
            |.::||...::||.:|.||..:|.:|:|||.|||.|:|||.|::||||||||||.|:|::|||||
 Frog   193 VGQAGIGLGVVIICLSVVVTSLTGVSMSAICTNGVVRGGGAYYLISRSLGPEFGGSIGLIFAFAN 257

  Fly   228 AVSASMNTIGFCESLNVLLKNNDLKIVDNGINDIRIVGSITVLVLILICCVGMEWETKAQNFLIV 292
            ||:.:|..:||.|::..:||:.:..:||. :|||||:|:|||::|:.|...|||||.|||..|:|
 Frog   258 AVAVAMYVVGFSETVVEILKDTNTIMVDE-VNDIRIIGTITVILLLGISVAGMEWEAKAQVVLLV 321

  Fly   293 TIVLAIFNFLIGAAIGPQGNEEQISRGFVGFSWATLKENFGSDYRYAEGVNHDFFSVFAIFFPSV 357
            .:::||.||.||..| |...|:: ::||..:......||||.|:|..||    ||||||||||:.
 Frog   322 ILLIAIVNFFIGTVI-PTTKEKR-AQGFFNYQATIFAENFGPDFRNGEG----FFSVFAIFFPAA 380

  Fly   358 TGIQAGANICGDLKDAGAAIPKGTFWSLLISMSSYALFVLFAGGAAVRDASGIPADLVNGTIVSS 422
            |||.|||||.|||||...||||||.|::||:..:|....:.|..:.||||:|    .:|.||.|:
 Frog   381 TGILAGANISGDLKDPQGAIPKGTMWAILITTIAYLGVAICAAASVVRDATG----NLNDTITSA 441

  Fly   423 -------------ELPCMATGNCTWGLFNSYEMMQEMSLWGPLIYAGCFAATLSTALTNLLSVPR 474
                         :.....|..|.:||.|::::|..:|.:||||.||.|:||||:||.:|:|.|:
 Frog   442 FKCNGSAACGLGYDFSICETQTCNYGLMNNFQVMSMVSGFGPLIIAGIFSATLSSALASLVSAPK 506

  Fly   475 LVQALGIDQIYPGLIFFSKPYGKHGEPYRGYVLTFFITTGFLLIGELNLIAPLISTFYLASYALI 539
            :.|||..|.||.||.||:|.:||:.||.|||||||.|...|:||.|||:|||:||.|:|||||||
 Frog   507 VFQALCKDNIYKGLHFFAKGHGKNNEPIRGYVLTFVIALAFILIAELNVIAPIISNFFLASYALI 571

  Fly   540 NFCTFHAAFVKPLGWRPTFKYYNAWLSLFGFAMCVAIMFLINYVAAIITFGIIFALYLVVMYRKP 604
            ||..|||::.|..||||.|||||.|:||||..:|..:||:||:.||:||:.|...||:.|.|:||
 Frog   572 NFSCFHASYAKSPGWRPAFKYYNMWVSLFGAMLCCGVMFVINWWAALITYAIELFLYIYVTYKKP 636

  Fly   605 EANWGSTTQAQQYKAALMAVHRLQNVSDHVKNYHPQVLVLSGDPKTRPPLVDFGYLLTKNNSLMF 669
            :.||||:|||.|:|.||.:...|..:.|||||:.||.:||:|.|.|||.|:|..:..|||:.|..
 Frog   637 DVNWGSSTQALQFKNALDSALGLNCIEDHVKNFRPQCIVLTGVPMTRPALLDITHSFTKNSGLCI 701

  Fly   670 VANII--PVRVGYKNRQHLVKDGQKYLDARKIKAFYNVIDGFSLEDGINALTKSTGFGKMSPNIV 732
            ...:.  |.:...|.....:...|.:|...|.||||..:...:..||:..|.:::|.|::.||.:
 Frog   702 CCEVFSGPRKQAVKEMNSGMIKKQTWLTNNKRKAFYAAVAADNFRDGVRTLLQASGLGRLKPNTL 766

  Fly   733 LVGYKPDWNRCRKEEVESYFSILYNAFSQRMGVALLRLPNGLDFSE---------------LSSE 782
            ::|:|.||.:....::.:|..||::||....||.::|:..|.|.|:               |:.|
 Frog   767 VMGFKKDWRQASPVDLANYVGILHDAFDFEHGVVIVRISQGFDISQVLQVKEEFDRLEQERLALE 831

  Fly   783 VTLPANGMGHMHTANAHGFTNELMPAANAASELLHIDSNLNLASMDSPNSSFTMPQPAPMPNMQR 847
            .|:..|   .....| ||    |....|..::|     |:|..|     |:..:..|.||...:.
 Frog   832 QTIKEN---EFKEGN-HG----LRSFFNKTAKL-----NINRHS-----STKDVSTPPPMHVGEY 878

  Fly   848 NSRSYKVTSSDEPAVTYHTKGGSDIPQNLLDAMTIFTRKQPKGTIDVFWLYDDGGLTILLPYIIS 912
            |                         |.|::|...|.:.|.||.|||:||:||||||:|:|:|::
 Frog   879 N-------------------------QRLVEASEQFKKNQGKGMIDVWWLFDDGGLTLLIPHILT 918

  Fly   913 MRSHWQNSKLRVFAMCHGKDEEQEEKSMASLLTKFRIKYSELIMLKGVSEQPRADTVLKHKRLIE 977
            :|..|::.|||:|........|.|:..|||||:|||||::::.::..::.:|..::....:.:||
 Frog   919 LRKKWKDCKLRIFIGGKVNRLEDEKLMMASLLSKFRIKFADIYIVGDINTKPSKESWKFFEEMIE 983

  Fly   978 PF---------------RRGARNEFGITDDELQSMSEKTNRQLRIHELVVKHSSNASLVVMSLPM 1027
            |:               ||  .|.:.|||.||:...||:.||:|::||:.:||.:|:|:|:|||:
 Frog   984 PYCLHENSTDVSTAEKIRR--ENPWKITDSELEMFKEKSYRQVRLNELLQEHSRSANLIVLSLPV 1046

  Fly  1028 PRKEAISAPLYMSWLEMLTSDMKCPVALARGNQTPVLTLYS 1068
            .||.::|..|||:|:|:|:.::. ||.|.|||...|||.||
 Frog  1047 ARKGSVSDHLYMAWVEILSKNLP-PVLLVRGNHKNVLTFYS 1086

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NKCCNP_730938.1 2a30 85..1068 CDD:273347 432/1046 (41%)
DUF502 507..>643 CDD:294696 78/135 (58%)
SLC12 651..1068 CDD:281515 141/448 (31%)
slc12a1XP_002936613.2 2a30 96..1086 CDD:273347 432/1046 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D135130at33208
OrthoFinder 1 1.000 - - FOG0001536
OrthoInspector 1 1.000 - - mtm9379
Panther 1 1.100 - - O PTHR11827
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

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