DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NKCC and slc12a1

DIOPT Version :9

Sequence 1:NP_730938.1 Gene:NKCC / 40663 FlyBaseID:FBgn0051547 Length:1068 Species:Drosophila melanogaster
Sequence 2:XP_021323409.1 Gene:slc12a1 / 100329975 ZFINID:ZDB-GENE-080130-3 Length:1037 Species:Danio rerio


Alignment Length:1064 Identity:437/1064 - (41%)
Similarity:625/1064 - (58%) Gaps:112/1064 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 GFGNFLRKSDAERKFSLAQLTKESLPRLDN---YR----ISMRNLKRPSIGEL------------ 111
            ||||..|:  |.|...::....::|.|:.|   ||    ||.....|||:.||            
Zfish    25 GFGNGERR--AIRSSVVSAFGHDTLDRVPNPDFYRNAASISGHRAVRPSLHELHDVFQKNGGLNL 87

  Fly   112 -----QGEAVDQSI-----TIPEPEPEATGGHIKLGWIVGVLIPCLLNIWGVMLFLRLSWVVAES 166
                 ..|.||.|.     ::...|.:.|||.:|.|||.|||:.|:|||||||||:|||||..::
Zfish    88 PSPVEDSEGVDSSTLGDVESVTPLEEKDTGGVVKFGWIKGVLVRCMLNIWGVMLFIRLSWVFGQA 152

  Fly   167 GILQSLIIITISAVVCVITTLSLSAISTNGEVKGGGVYFIISRSLGPEFGASVGVVFAFANAVSA 231
            ||...::::.:|.||..:|.||:|||.|||.|:|||.|::||||||||||.|:|::|||||||:.
Zfish   153 GIGLGIVVVLLSMVVTSVTCLSMSAICTNGVVRGGGAYYLISRSLGPEFGGSIGLIFAFANAVAV 217

  Fly   232 SMNTIGFCESLNVLLKNNDLKIVDNGINDIRIVGSITVLVLILICCVGMEWETKAQNFLIVTIVL 296
            :|..:||.|::..|||:::..||| ..|||||:|.|||::|:.|...|||||.|||..|:|.:::
Zfish   218 AMYVVGFAETVVELLKDSNALIVD-PTNDIRIIGCITVVLLMGITVAGMEWEAKAQVALLVILLV 281

  Fly   297 AIFNFLIGAAIGPQGNEEQISRGFVGFSWATLKENFGSDYRYAEGVNHDFFSVFAIFFPSVTGIQ 361
            ||.|..:|..|  ...:::.|:||..:..:..||||..|:|..|    .||||||||||:.|||.
Zfish   282 AIANVFVGTVI--PSTQDKRSKGFFNYHESIAKENFIPDFRDGE----TFFSVFAIFFPAATGIL 340

  Fly   362 AGANICGDLKDAGAAIPKGTFWSLLISMSSYALFVLFAGGAAVRDASGIPADLVN-GTIVSSELP 425
            |||||.|||:|...|:||||..::.|:..:|....|......||||:|...|.:. |...:....
Zfish   341 AGANISGDLRDPQGALPKGTLLAIFITGVTYLGIALVVSVTVVRDATGNRNDTIQAGASCNFSSA 405

  Fly   426 C--------MATGNCTWGLFNSYEMMQEMSLWGPLIYAGCFAATLSTALTNLLSVPRLVQALGID 482
            |        ..|..|.:||.|::::|..:|.:||||.||.|:||||:||.:|:|.|::.|||..|
Zfish   406 CDFGYDFSICQTTKCNYGLMNNFQVMTLVSGFGPLITAGTFSATLSSALASLVSAPKVFQALCKD 470

  Fly   483 QIYPGLIFFSKPYGKHGEPYRGYVLTFFITTGFLLIGELNLIAPLISTFYLASYALINFCTFHAA 547
            .||..|.||:|.:||:.||.|||||||.|...|:||.:||.|||:||.|:||||||||:..|||:
Zfish   471 NIYKALKFFAKGHGKNNEPIRGYVLTFIIAVAFILIAQLNTIAPIISNFFLASYALINYSCFHAS 535

  Fly   548 FVKPLGWRPTFKYYNAWLSLFGFAMCVAIMFLINYVAAIITFGIIFALYLVVMYRKPEANWGSTT 612
            :.|..||||.:||||.||||||..:|.|:||:||:.||::|:||.|.||:.|..:||:.||||:|
Zfish   536 YAKSPGWRPAYKYYNMWLSLFGAVLCCAVMFVINWWAALLTYGIEFFLYIYVTVKKPDVNWGSST 600

  Fly   613 QAQQYKAALMAVHRLQNVSDHVKNYHPQVLVLSGDPKTRPPLVDFGYLLTKNNSLMFVANIIPVR 677
            ||..:..|:.....|..|.||:||:.|:.|||:|.|::||.|:|..:..|||..|.....:.   
Zfish   601 QAVTFINAVNNALILSGVDDHIKNFRPKCLVLTGSPRSRPALLDLSHSFTKNYGLCLTCEVF--- 662

  Fly   678 VGY--KNRQHLVK---DGQKYLDARKIKAFYNVIDGFSLEDGINALTKSTGFGKMSPNIVLVGYK 737
            ||.  ||.|.:::   ..|.:|:.:|.||||..|...:|.||..||.:::|.|:|.||.|::|:|
Zfish   663 VGSRDKNLQDMIEGDVQNQLWLNKQKHKAFYTPIASDTLRDGAQALMQASGLGRMKPNTVMLGFK 727

  Fly   738 PDWNRCRKEEVESYFSILYNAFSQRMGVALLRLPNGLDFSELSSEVTLPANGMGHMHTANAHGFT 802
            .||...:.::|::|..||::.|...:|..::|:..|:|.|                |...|    
Zfish   728 RDWRTSKPQDVQNYVGILHDTFDFELGTVIMRVSQGMDIS----------------HILKA---- 772

  Fly   803 NELMPAANAASELLHIDSNLNLASMDSPNSSFTMPQPAPMPNMQRNSRSYKVTSSDEPA--VTYH 865
            .|.|.......:.|.::.|           .|   ||.|.....|    .|.|...||.  |:..
Zfish   773 EEEMERMILEQQALEMEEN-----------DF---QPGPRGFFNR----AKKTPKKEPTSKVSLG 819

  Fly   866 TKGGSDIP---QNLLDAMTIFTRKQPKGTIDVFWLYDDGGLTILLPYIISMRSHWQNSKLRVFAM 927
            ....||:.   |.|::|...|.::|.||.|||:||:||||||:|||:|::.|..|:..:||:|..
Zfish   820 VPQASDLAKLNQRLVEASGQFKQQQGKGNIDVWWLFDDGGLTLLLPHILTTRKKWRECRLRIFIA 884

  Fly   928 CHGKDEEQEEKSMASLLTKFRIKYSELIMLKGVSEQPRADTVLKHKRLIEPFR--RGARNE---- 986
            ...:..:|:::.|..||.|||||..::.::..::.:|.|:.....:.:|||||  .|:::.    
Zfish   885 GQPERIQQDKEEMQLLLKKFRIKCEDIKVISDLNIRPSAENWKLFEDMIEPFRLHEGSKDSSQTE 949

  Fly   987 -------FGITDDELQSMSEKTNRQLRIHELVVKHSSNASLVVMSLPMPRKEAISAPLYMSWLEM 1044
                   :.|||.||.:..:||..|:|::||:.:.|..|.|:|:|||:.||.::|..|||:|||.
Zfish   950 ALRKEQPWKITDAELDAFEQKTMLQVRLNELLQESSRAAKLIVVSLPIARKGSVSDHLYMAWLEA 1014

  Fly  1045 LTSDMKCPVALARGNQTPVLTLYS 1068
            ||.::. |..|.|||...|||:||
Zfish  1015 LTKNLP-PTLLIRGNHKSVLTIYS 1037

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NKCCNP_730938.1 2a30 85..1068 CDD:273347 428/1043 (41%)
DUF502 507..>643 CDD:294696 73/135 (54%)
SLC12 651..1068 CDD:281515 145/439 (33%)
slc12a1XP_021323409.1 2a30 45..1037 CDD:273347 428/1040 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57166
OrthoDB 1 1.010 - - D135130at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101360
Panther 1 1.100 - - O PTHR11827
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.930

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