DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NKCC and slc12a2

DIOPT Version :9

Sequence 1:NP_730938.1 Gene:NKCC / 40663 FlyBaseID:FBgn0051547 Length:1068 Species:Drosophila melanogaster
Sequence 2:XP_002931755.1 Gene:slc12a2 / 100038244 XenbaseID:XB-GENE-489652 Length:1161 Species:Xenopus tropicalis


Alignment Length:1141 Identity:468/1141 - (41%)
Similarity:663/1141 - (58%) Gaps:152/1141 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RFQISKVNGTA-------NAGYDGEARSAESDQTDAAHPLPPTSNENHLHPKASGETGE----NR 57
            ||:::.|:..:       |||.||..........|.      ..:|..||   ||.||.    :.
 Frog    97 RFRVNFVDPASPGGSSPENAGVDGGGGGVSFQNGDT------VLSEGSLH---SGGTGHHYHYDT 152

  Fly    58 RSSRLSFRGFGNFLRKSDAERKFSLAQLTKESLPRLDNYRISM----RNLKRPSIGELQGEAVDQ 118
            .::....|.||:               .|.:::||:|:||.:.    ..|.|||:.||..| :|:
 Frog   153 HTNTYYLRTFGH---------------NTIDAVPRIDHYRHTAADLGEKLLRPSLAELHDE-LDK 201

  Fly   119 SITIPEP---------EPEATG----------GHIKLGWIVGVLIPCLLNIWGVMLFLRLSWVVA 164
                 ||         |...||          |.:|.|||.|||:.|:|||||||||:||||:|.
 Frog   202 -----EPFEDGFANGEEGTPTGDAATTVADSKGVVKFGWIKGVLVRCMLNIWGVMLFIRLSWIVG 261

  Fly   165 ESGILQSLIIITISAVVCVITTLSLSAISTNGEVKGGGVYFIISRSLGPEFGASVGVVFAFANAV 229
            ::||..::::|:::.||..||.||.|||:|||.|:|||.|::||||||||||.::|::|||||||
 Frog   262 QAGIGLTVVVISMATVVTTITGLSTSAIATNGFVRGGGAYYLISRSLGPEFGGAIGLIFAFANAV 326

  Fly   230 SASMNTIGFCESLNVLLKNNDLKIVDNGINDIRIVGSITVLVLILICCVGMEWETKAQNFLIVTI 294
            :.:|..:||.|::..|||.|...:||: ||||||:|:|||::|:.|...|||||.|||..|:|.:
 Frog   327 AVAMYVVGFAETVVELLKENGALMVDD-INDIRIIGAITVVLLLGISVAGMEWEAKAQIVLLVIL 390

  Fly   295 VLAIFNFLIGAAIGPQGNEEQISRGFVGFSWATLKENFGSDYRYAEGVNHDFFSVFAIFFPSVTG 359
            :|||.:|.||..|   .:|::..:||.|:......||||.|:|..|    .||||||||||:.||
 Frog   391 LLAIVDFFIGTVI---PSEDKKPKGFFGYKADIFSENFGPDFREGE----TFFSVFAIFFPAATG 448

  Fly   360 IQAGANICGDLKDAGAAIPKGTFWSLLISMSSYALFVLFAGGAAVRDASGIPADLVNGTIVSSEL 424
            |.|||||.|||.|...|||:||..::||:...|....:..|...||||||.    ||.|:.::..
 Frog   449 ILAGANISGDLADPQHAIPRGTLLAILITTVVYMGVAVSVGSCVVRDASGD----VNSTLSAAMT 509

  Fly   425 PCMATG------------NCTWGLFNSYEMMQEMSLWGPLIYAGCFAATLSTALTNLLSVPRLVQ 477
            .|....            .|.:||.||:::|..:|.:.|||.||.|:||||:||.:|:|.|::.|
 Frog   510 NCTTAACNLNYDFSSCGHECKYGLMNSFQVMSMVSGFAPLITAGIFSATLSSALASLVSAPKVFQ 574

  Fly   478 ALGIDQIYPGLIFFSKPYGKHGEPYRGYVLTFFITTGFLLIGELNLIAPLISTFYLASYALINFC 542
            ||..|.|||||..|:|.|||:.||.|||:|||.|..||:||.|||||||:||.|:|||||||||.
 Frog   575 ALCKDNIYPGLQMFAKGYGKNNEPLRGYLLTFIIALGFILIAELNLIAPIISNFFLASYALINFS 639

  Fly   543 TFHAAFVKPLGWRPTFKYYNAWLSLFGFAMCVAIMFLINYVAAIITFGIIFALYLVVMYRKPEAN 607
            .|||:..|..||||.|:|||.|:||.|..:|..:||:||:.||::|:.|:..||:.|.|:||:.|
 Frog   640 VFHASLAKSPGWRPAFRYYNMWVSLIGALLCCGVMFVINWWAALLTYVIVIGLYIYVTYKKPDVN 704

  Fly   608 WGSTTQAQQYKAALMAVHRLQNVSDHVKNYHPQVLVLSGDPKTRPPLVDFGYLLTKNNSLMFVAN 672
            |||:|||..|..||....||..|.|||||:.||.|||.|.|.:||.|:...:..|||..||...:
 Frog   705 WGSSTQALTYLNALQHTIRLAGVEDHVKNFRPQCLVLIGAPNSRPALLHLVHAFTKNVGLMICGH 769

  Fly   673 IIPVRVGYKNR--QHLVKDG---QKYLDARKIKAFYNVIDGFSLEDGINALTKSTGFGKMSPNIV 732
               |.:|.:.:  :.|:.|.   |::|...|.||||:.:....|.||...|.::.|.|:|.||.:
 Frog   770 ---VHMGPRRQAMKELLTDQARYQRWLIKNKTKAFYSPVHAEDLRDGAQYLMQAAGLGRMRPNTL 831

  Fly   733 LVGYKPDWNRCRKEEVESYFSILYNAFSQRMGVALLRLPNGLDFSELSSEVTLPANGMGHMHTAN 797
            :||:|.:|::|...|||:|.::.::||..:.||.::||..|||.|.|..:..|.:          
 Frog   832 VVGFKKNWSQCDMREVETYINLFHDAFDFQYGVVVIRLKEGLDISHLQGQEELLS---------- 886

  Fly   798 AHGFTNELMPAANAA------SELLHIDSNLNLASMDSPNSSFTMPQPAPMPNMQRNSRSYKVTS 856
                :.|..|.....      |:....:|:...||..||              |.|........:
 Frog   887 ----SQEKSPGTKDVVVNVDYSKKAEAESSRPFASDSSP--------------MMRKDEEDDGKT 933

  Fly   857 SDEPAVTYHTKG-GSDI---PQNLLDAMTIFTRKQPKGTIDVFWLYDDGGLTILLPYIISMRSHW 917
            ..:|.:...:|| |..:   .|.||||...|.:||.|.||||:||:||||||:|:||:|:.:..|
 Frog   934 PTQPLLKKDSKGQGISLDTADQRLLDASLQFQKKQGKSTIDVWWLFDDGGLTLLIPYLITSKKKW 998

  Fly   918 QNSKLRVFAMCHGKDE--EQEEKSMASLLTKFRIKYSELIMLKGVSEQPRADTVLKHKRLIEPFR 980
            ::.|:|||  ..||..  :.:.::||:||:||||.:|::::|..::.:|:.:.|...:.:|||||
 Frog   999 RDCKIRVF--IGGKINRIDHDRRAMATLLSKFRIDFSDIMVLGDINTKPKKENVAAFEEMIEPFR 1061

  Fly   981 -------------RGARNEFGITDDELQSMSEKTNRQLRIHELVVKHSSNASLVVMSLPMPRKEA 1032
                         ......:.|||:||:....||:||:|::||:.:|||.|:.:|||||:.||.|
 Frog  1062 LHEDEKDQEVAEKMKEEEPWRITDNELELYKTKTHRQIRLNELLKEHSSTANAIVMSLPVARKSA 1126

  Fly  1033 ISAPLYMSWLEMLTSDMKCPVALARGNQTPVLTLYS 1068
            :|:.|||:|:|.|:.|:. |:.|.|||...|||.||
 Frog  1127 VSSALYMAWIEALSKDLP-PILLVRGNHQSVLTFYS 1161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NKCCNP_730938.1 2a30 85..1068 CDD:273347 447/1047 (43%)
DUF502 507..>643 CDD:294696 78/135 (58%)
SLC12 651..1068 CDD:281515 152/446 (34%)
slc12a2XP_002931755.1 2a30 165..1161 CDD:273347 447/1047 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D135130at33208
OrthoFinder 1 1.000 - - FOG0001536
OrthoInspector 1 1.000 - - mtm9379
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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