DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ksr and CTR1

DIOPT Version :9

Sequence 1:NP_001287177.1 Gene:ksr / 40660 FlyBaseID:FBgn0015402 Length:966 Species:Drosophila melanogaster
Sequence 2:NP_195993.1 Gene:CTR1 / 831748 AraportID:AT5G03730 Length:821 Species:Arabidopsis thaliana


Alignment Length:641 Identity:174/641 - (27%)
Similarity:256/641 - (39%) Gaps:199/641 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   353 LMVPCSPGVGHVGMGHAIKHRFTKALGFMATCTLCQKQVFHRWMKC---TDCKYICHKSCAPHVP 414
            ::||    :|.:.:| ..:||   ||.|.....:..       :.|   ..||| |::..|....
plant   344 VVVP----IGSLSVG-LCRHR---ALLFKVLADIID-------LPCRIAKGCKY-CNRDDAASCL 392

  Fly   415 PSCGLPREYVDEFRHIKEQGGYASLPHVHGAAKGSPLVKKSTLGKPLHQQHGDS--SSPSSSCTS 477
            ...||.|||:.:.                             :|||.|....||  :.|||...|
plant   393 VRFGLDREYLVDL-----------------------------VGKPGHLWEPDSLLNGPSSISIS 428

  Fly   478 S-------TPSSPAL-FQQRERELDQAGSSSSANLLPTPSLGKHQPSQFN--FPNVTVTSSGGSG 532
            |       .|..||: |:...::  ....|.|.||:..|:......|.|:  :.|        .|
plant   429 SPLRFPRPKPVEPAVDFRLLAKQ--YFSDSQSLNLVFDPASDDMGFSMFHRQYDN--------PG 483

  Fly   533 GVSLISNEPVPEQFPTAPATANGGLDSLVSSSNGHMSSLIGSQTSNASTAATLTGSLVNSTTTTS 597
            |    .|:.:.|         ||| .||..|:|....:::  :.||...||.:....::...   
plant   484 G----ENDALAE---------NGG-GSLPPSANMPPQNMM--RASNQIEAAPMNAPPISQPV--- 529

  Fly   598 TCSFFPRKLSTAGVDKRTPFTSEYTDTHKSNDSDKTVSLSGSASTDSDRTPVRVDSTEDGDSGQW 662
                                         .|.:::.:.|                   |||    
plant   530 -----------------------------PNRANRELGL-------------------DGD---- 542

  Fly   663 RQNSISLKEWDIPYGDLLLLERIGQGRFGTVHRALWHG-DVAVKLLNEDYLQDEH--MLETFRSE 724
                    :.|||:.||.:.|:||.|.|||||||.||| |||||:|.|   ||.|  .:..|..|
plant   543 --------DMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILME---QDFHAERVNEFLRE 596

  Fly   725 VANFKNTRHENLVLFMGACMNPPYLAIVTSLCKGNTLYTYIHQ--RREKFAMNRTLLIAQQIAQG 787
            ||..|..||.|:||||||...||.|:|||......:||..:|:  .||:....|.|.:|..:|:|
plant   597 VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 661

  Fly   788 MGYLHARE--IIHKDLRTKNIFIENGKVI-ITDFGL--FSSTKLLYCDMGLGVPHNWLCYLAPEL 847
            |.|||.|.  |:|:||::.|:.::....: :.||||  ..::..|......|.|.    ::|||:
plant   662 MNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPE----WMAPEV 722

  Fly   848 IRALQPEKPRGECLEFTPYSDVYSFGTVWYELICGEFTFKDQPAESIIWQVG---------RGMK 903
            :|    ::|..|      .|||||||.:.:||...:..:.:.....::..||         |.:.
plant   723 LR----DEPSNE------KSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLN 777

  Fly   904 QSLANLQSGRDVKDLLMLCWTYEKEHRPQFARLLSLLEHLPKKRLARSPSHPVNLS 959
            ..:|.:..|         |||.|...||.||.::.||     :.|.:|...|.|.|
plant   778 PQVAAIIEG---------CWTNEPWKRPSFATIMDLL-----RPLIKSAVPPPNRS 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ksrNP_001287177.1 KSR1-SAM 33..166 CDD:290277
C1_1 368..419 CDD:278556 11/53 (21%)
PK_KSR 678..946 CDD:270965 103/286 (36%)
Pkinase_Tyr 679..940 CDD:285015 100/279 (36%)
CTR1NP_195993.1 EDR1 208..413 CDD:291079 24/113 (21%)
TyrKc 551..805 CDD:197581 100/279 (36%)
STKc_MAP3K-like 557..805 CDD:270901 98/273 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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