DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ksr and braf

DIOPT Version :9

Sequence 1:NP_001287177.1 Gene:ksr / 40660 FlyBaseID:FBgn0015402 Length:966 Species:Drosophila melanogaster
Sequence 2:XP_031754388.1 Gene:braf / 779570 XenbaseID:XB-GENE-1014202 Length:963 Species:Xenopus tropicalis


Alignment Length:917 Identity:235/917 - (25%)
Similarity:360/917 - (39%) Gaps:275/917 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 LEQSLRLSDEEIRQLL------ADSPS---QREEEELRRLTRAMQNLRKCMESLESGTAASNNDP 183
            ::|.::|:.|.|..||      .:.||   :..||...:|....|..::.:||:.:||       
 Frog    57 IKQMIKLTQEHIEALLDKFGGEHNPPSIYVEAYEEYTSKLDLLQQREQQLLESMGNGT------- 114

  Fly   184 EQWHWDSWDRPTHIHRGSV-GNIGLGNNSTASPRTHHRQHGVKGKNSALANSTNFKSGRQSPSAT 247
                 ||...|:.:...|| .|:.|..::.::.||                          ||..
 Frog   115 -----DSTSLPSELTLSSVPSNLSLAPSALSALRT--------------------------PSDP 148

  Fly   248 EELNSTQGSQLTLTLTPSPPNSP----FTPSSGLSSSLNGTPQRSRGTPPPARKHQTLL------ 302
            ..:|            |..|..|    |.|    :......|.||..|...:.|...::      
 Frog   149 SRIN------------PKSPQKPIVRVFLP----NKQRTVVPARSGVTVRDSLKKALMMRGLIPE 197

  Fly   303 --SQSHVQVDGEQLARNRLPTDPSPDSHSSTSSDIFVDPNTNASSGGSSSNVLMVPCSPGVGHVG 365
              :...|| |||     :.|.....|....|..::.|:...|            ||.:       
 Frog   198 CCAVYRVQ-DGE-----KKPIGWDTDISWITGEELHVEVLEN------------VPLT------- 237

  Fly   366 MGHAIKHRFTKALGF-MATCTLCQKQVFHRWMKCTDCKYICHKSCAPHVPPSC----GLPREYVD 425
                 .|.|.:...| :|.|..|:|.:| :..:|..|.|..|:.|:..||..|    .|...:|.
 Frog   238 -----THNFVRKTFFTLAFCDFCRKLLF-QGFRCQTCGYKFHQRCSTEVPLMCVNYDRLDLLFVS 296

  Fly   426 E-FRHIKEQGGYASLPHVHGAAKGS----------PLVKKSTLGKPLHQQHGDSSSPSSSCTSST 479
            : |.|.......|....|..||:.|          ||...||             |||.|.....
 Frog   297 KFFEHHPISQEEAPFEEVAPAAESSTPPPPPDATGPLCLPST-------------SPSKSIPIPQ 348

  Fly   480 PSSPALFQQRERELDQAGSSSSANLLPTPSLGKHQPSQFNFPNVTVTSSGGSGGVSLISNEPVPE 544
            |..|.  :....:..|...||||                  |||.:.:.           |||  
 Frog   349 PFRPD--EDHRNQFGQRDRSSSA------------------PNVHINTI-----------EPV-- 380

  Fly   545 QFPTAPATANGGLDSLVSSSNGHMSSLIGSQTSNASTAA-------------------TLTGSLV 590
                       .:|.|:...        |.|.|..:.:.                   ||...:|
 Frog   381 -----------NIDDLIRDQ--------GLQCSEGAPSVQPTRCHRKYHSRDPSPLLHTLPSEIV 426

  Fly   591 NSTTTTSTCSFFPRKLSTAGVDKRTPFTSEYTDTH-----KSNDSDKTVSLSGSASTDSDR--TP 648
            ....:...|     :.||.|:....|.:...:.|:     ||....:....|.|::.|..|  |.
 Frog   427 FDFESDPVC-----RGSTPGLSATPPASLPGSLTNVKALQKSPGQQRERKSSSSSTEDRSRMKTL 486

  Fly   649 VRVDSTEDGDSGQWRQNSISLKEWDIPYGDLLLLERIGQGRFGTVHRALWHGDVAVKLLNEDYLQ 713
            .|.||::|               |:||.|.:.:.:|||.|.||||::..||||||||:||.. ..
 Frog   487 GRRDSSDD---------------WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVT-AP 535

  Fly   714 DEHMLETFRSEVANFKNTRHENLVLFMGACMNPPYLAIVTSLCKGNTLYTYIHQRREKFAMNRTL 778
            ....|:.|::||...:.|||.|::|||| ....|.|.:||..|:|::||.::|....||.|.:.:
 Frog   536 TPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTKPQLRLVTQWCEGSSLYHHLHIIETKFEMIKLI 599

  Fly   779 LIAQQIAQGMGYLHAREIIHKDLRTKNIFI-ENGKVIITDFGLFSSTKLLYCDMGLGVPHNW--- 839
            .||:|.||||.||||:.|||:||::.|||: |:..|.|.||||.:            |...|   
 Frog   600 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT------------VKSRWSGS 652

  Fly   840 ---------LCYLAPELIRALQPEKPRGECLEFTPYSDVYSFGTVWYELICGEFTFKD-QPAESI 894
                     :.::|||:|| :|...|      ::..||||:||.|.|||:.|:..:.: ...:.|
 Frog   653 HQFEQLSGSILWMAPEVIR-MQDNNP------YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 710

  Fly   895 IWQVGRG-MKQSLANLQSG--RDVKDLLMLCWTYEKEHRPQFARLLSLLEHLPKK--RLARSPSH 954
            |:.|||| :....:.::|.  :.:|.|:..|...:::.||.|.::|:.:|.|.:.  ::.||.|.
 Frog   711 IFMVGRGYLSPDFSKVRSNCPKAMKRLMADCLKKKRDERPLFPQILASIELLARSLPKIHRSASE 775

  Fly   955 PVNLSRS 961
            | :|:|:
 Frog   776 P-SLNRA 781

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ksrNP_001287177.1 KSR1-SAM 33..166 CDD:290277 12/46 (26%)
C1_1 368..419 CDD:278556 16/55 (29%)
PK_KSR 678..946 CDD:270965 104/284 (37%)
Pkinase_Tyr 679..940 CDD:285015 102/277 (37%)
brafXP_031754388.1 RBD_BRAF 158..236 CDD:340654 19/99 (19%)
C1 234..293 CDD:412127 19/71 (27%)
STKc_Raf 508..760 CDD:270964 101/272 (37%)
DERM 815..962 CDD:405404
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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