DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ksr and map3k10

DIOPT Version :9

Sequence 1:NP_001287177.1 Gene:ksr / 40660 FlyBaseID:FBgn0015402 Length:966 Species:Drosophila melanogaster
Sequence 2:XP_689424.4 Gene:map3k10 / 560932 ZFINID:ZDB-GENE-050419-112 Length:1062 Species:Danio rerio


Alignment Length:501 Identity:134/501 - (26%)
Similarity:200/501 - (39%) Gaps:136/501 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   521 PNVTVTSSGGSGGVSLISNEPVPEQFPTAPATANGGLDSLVSSSNGHMSSLIGSQTSNASTAATL 585
            |:..::..|..||.|.   .|:       |..::||       |.||   |:...| .|:|.:|.
Zfish     3 PHTRLSGVGAGGGGSA---APL-------PCISSGG-------SCGH---LVPPDT-QANTNSTP 46

  Fly   586 TGSLVNSTTTTSTCSFFPRKLSTAGVDKRTPFTSEYTDTHKSNDSDKTVSLSGSASTDSDRTPVR 650
            ....:||:..:||   .|.  |....|...|      ..|:|:::..|......|:.|.:.|..|
Zfish    47 FLISINSSRNSST---IPS--SVGSPDSHLP------HHHESSNTYWTAVFDYEATADEELTLRR 100

  Fly   651 --------VDSTEDGDSGQWR---QNSISL-------------------------KEWDIPYGDL 679
                    .||...||.|.|.   |:.:.:                         ...:|.:.:|
Zfish   101 GDLLEVLSKDSKVSGDEGWWTGKIQDKVGIFPCNYVTQRDSSYPALPPEALVGGDSPLEIDFLEL 165

  Fly   680 LLLERIGQGRFGTVHRALWHG-DVAVKLLNEDYLQDEHM---LETFRSEVANFKNTRHENLVLFM 740
            .|.|.||.|.||.|::.:|.. :||||...:|  .||.:   .|..|.|...|...||.|::...
Zfish   166 RLEEVIGAGGFGKVYKGVWRAEEVAVKAARQD--PDEDISATAENVRQEARLFWMLRHRNIIALR 228

  Fly   741 GACMNPPYLAIVTSLCKGNTLYTYIHQRREKFAMNRTL---------LI--AQQIAQGMGYLHAR 794
            |.|:..|.|.:|....:|.             |:||.|         |:  |.|||.||.|||.:
Zfish   229 GVCLREPNLCLVMEYARGG-------------ALNRALAGKKVPPRVLVNWAVQIATGMDYLHNQ 280

  Fly   795 ---EIIHKDLRTKNIFI--------ENGKVI-ITDFGL----FSSTKLLYCDMGLGVPHNWLCYL 843
               .|||:||::.||.|        .:||.: ||||||    ..:||     |.....:.|   :
Zfish   281 TFVPIIHRDLKSSNILILEPVERDDLSGKTLKITDFGLAREWHRTTK-----MSAAGTYAW---M 337

  Fly   844 APELIRALQPEKPRGECLEFTPYSDVYSFGTVWYELICGEFTFKDQPAESIIWQVGRGMKQSLAN 908
            |||:|:...          |:..|||:|||.:.:||:.||..:::..|.::.:  |..|.:....
Zfish   338 APEVIKLSL----------FSKSSDVWSFGVLLWELLTGEVPYREIDALAVAY--GVAMNKLTLP 390

  Fly   909 LQS--GRDVKDLLMLCWTYEKEHRPQFARLLSLLEHLPKKRLARSP 952
            :.|  ......||..||......||.|..:|..||.:.:..:.:.|
Zfish   391 IPSTCPEAFAQLLGECWCPNPRGRPAFGSILKRLEDIEQSAMFQMP 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ksrNP_001287177.1 KSR1-SAM 33..166 CDD:290277
C1_1 368..419 CDD:278556
PK_KSR 678..946 CDD:270965 93/300 (31%)
Pkinase_Tyr 679..940 CDD:285015 91/293 (31%)
map3k10XP_689424.4 SH3_MLK1-3 81..138 CDD:212992 12/56 (21%)
STYKc 165..424 CDD:214568 91/293 (31%)
STKc_MLK2 170..427 CDD:271050 90/291 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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