DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ksr and raf1

DIOPT Version :9

Sequence 1:NP_001287177.1 Gene:ksr / 40660 FlyBaseID:FBgn0015402 Length:966 Species:Drosophila melanogaster
Sequence 2:XP_031755972.1 Gene:raf1 / 549871 XenbaseID:XB-GENE-6053330 Length:658 Species:Xenopus tropicalis


Alignment Length:792 Identity:219/792 - (27%)
Similarity:334/792 - (42%) Gaps:204/792 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 VKGKNSALANSTNFK------SGRQSPSATEEL--------------NSTQGSQLTLTLTPSPPN 268
            ::|....::|...||      |...||:...:.              .|..||.:.:.| |:...
 Frog     4 IQGAWKTISNGFGFKDSVFDGSSCMSPTIGHQFGYQRRASDDGKLSDTSKTGSTMRVYL-PNKQR 67

  Fly   269 SPFTPSSGLSSSLNGTPQRSRGTPPPARKHQTLLSQSHVQ-VDGEQLARNRLPTDPSPDSHSSTS 332
            :.....||:|                  .|..|:....|: :..|..|..||..||        .
 Frog    68 TVVNVRSGMS------------------LHDCLMKALKVRGLQPECCAVFRLIQDP--------K 106

  Fly   333 SDIFVDPNTNASS-GGSSSNVLMVPCSPGVGHVGMGHAIKHRFTKALGFMATCTLCQKQVFHRWM 396
            ..:.:|.||:|.| .|:...|..:...|...|    :.::..|.|    :|.|.:|||.:.:.: 
 Frog   107 GKLRLDWNTDAMSLVGAELQVDFLDHVPLTTH----NFVRKTFLK----LAFCDICQKFLLNGF- 162

  Fly   397 KCTDCKYICHKSCAPHVPPSCGLPREYVDEFRHIKE----------QGGYASLPHVHGAAKGSPL 451
            :|..|.|..|:.|:..||..|      || :.:|::          :||..:||        |..
 Frog   163 RCQTCGYKFHEHCSTKVPTMC------VD-WSNIRQLLLFPNPNNMEGGSHTLP--------SLT 212

  Fly   452 VK--KSTLGKPL-HQQHGDSSSPSSSCTSSTPSSPALFQQRERELDQAGSSSSANLLPTPSLGKH 513
            |:  :.::..|: .||...:..|.|..|.|.||..:| .||:|      |:|:            
 Frog   213 VRRMRESVRIPISSQQRYSTPHPFSFSTPSAPSECSL-SQRQR------STST------------ 258

  Fly   514 QPSQFNFPNVTVTSSGGSGGVSLISNEPVPEQFPTAPATANGGLDSLVSSSNGHMSSLIGSQTSN 578
                   |||                                           ||          
 Frog   259 -------PNV-------------------------------------------HM---------- 263

  Fly   579 ASTAATLTGSLVNSTTTTSTCSFFPRKLSTAGVDKRTPFTSEYTDTHKSNDSDKTVSLSGSASTD 643
            .||...:...|:.:.....:.|.:.|:|...|.|.        ..:|..:.|...:|.:|.::| 
 Frog   264 VSTTMAVDSRLIENNWLNVSPSSWGRQLCMRGRDA--------VRSHSDSGSPNNLSPTGWSNT- 319

  Fly   644 SDRTPVRVDSTEDGDSGQWRQNSI-------SLKEWDIPYGDLLLLERIGQGRFGTVHRALWHGD 701
              :||......:...|....:|.|       |...|:|...:::|..|||.|.||||::..||||
 Frog   320 --KTPAPTHREKAASSSGQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGD 382

  Fly   702 VAVKLLNEDYLQDEHMLETFRSEVANFKNTRHENLVLFMGACMNPPYLAIVTSLCKGNTLYTYIH 766
            ||||:|.......| .|:.||:|||..:.|||.|::|||| .|....|||||..|:|::||.::|
 Frog   383 VAVKILKVTNPTPE-QLQAFRNEVAVLRKTRHVNILLFMG-YMTKENLAIVTQWCEGSSLYKHLH 445

  Fly   767 QRREKFAMNRTLLIAQQIAQGMGYLHAREIIHKDLRTKNIFIENGKVI-ITDFGLFSSTKLLYCD 830
            ....||.|.:.:.||:|.||||.||||:.|||:|:::.|||:..|..: |.||||.:........
 Frog   446 VLETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 510

  Fly   831 MGLGVPHNWLCYLAPELIRALQPEKPRGECLEFTPYSDVYSFGTVWYELICGEFTFKD-QPAESI 894
            ..:..|...:.::|||:|| :|...|      |:..|||||:|.|.:||:.||..:.. :..:.|
 Frog   511 QQVEQPTGSILWMAPEVIR-MQDNNP------FSFQSDVYSYGIVLFELMTGELPYSHIRDRDQI 568

  Fly   895 IWQVGR-GMKQSLANLQSG--RDVKDLLMLCWTYEKEHRPQFARLLS---LLEH-LPKKRLARSP 952
            |:.||| |....|:.|...  :.:|.|:..|....:|.||.|.::||   ||:| |||  :.||.
 Frog   569 IFLVGRGGTVPDLSKLYKNCPKAMKRLVADCIKKMREERPLFPQILSSIELLQHSLPK--INRSA 631

  Fly   953 SHPVNLSRSAES 964
            |.| :|.|:|.:
 Frog   632 SEP-SLHRAAHT 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ksrNP_001287177.1 KSR1-SAM 33..166 CDD:290277
C1_1 368..419 CDD:278556 15/50 (30%)
PK_KSR 678..946 CDD:270965 113/276 (41%)
Pkinase_Tyr 679..940 CDD:285015 108/268 (40%)
raf1XP_031755972.1 RBD_CRAF 56..130 CDD:340655 22/100 (22%)
C1_A_C-Raf 135..186 CDD:410420 18/66 (27%)
STKc_C-Raf 347..629 CDD:271051 117/292 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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