DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ksr and braf

DIOPT Version :9

Sequence 1:NP_001287177.1 Gene:ksr / 40660 FlyBaseID:FBgn0015402 Length:966 Species:Drosophila melanogaster
Sequence 2:NP_001311445.1 Gene:braf / 403065 ZFINID:ZDB-GENE-040805-1 Length:817 Species:Danio rerio


Alignment Length:905 Identity:240/905 - (26%)
Similarity:380/905 - (41%) Gaps:249/905 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 LEQSLRLSDEEIRQLL------ADSPS---QREEEELRRLTRAMQNLRKCMESLESGTAASNNDP 183
            ::|.::|:.|.:..||      .:.||   :..||...:|....|..::.:|::.:||       
Zfish    60 IKQMIKLTQEHLEALLDKFGGEHNPPSIYLEAYEEYTSKLDALQQREQQLLEAIGNGT------- 117

  Fly   184 EQWHWDSWDRPTHIHRGSVGNIGLGNNSTASPRTHHRQHGVKGKN-SALANSTNFKSGRQSPSAT 247
               .:.|...||.:                         .|||:. .:...:.|..:..|:|:  
Zfish   118 ---EFCSSPTPTLL-------------------------DVKGQGIQSAPTAPNTLAVLQTPT-- 152

  Fly   248 EELNSTQGSQLTLTLTPSPPNSP----FTPSSGLSSSLNGTPQRSRGTPPPARKHQTL---LSQS 305
               ::|:|:       |..|..|    |.|:.          ||   |..|||...|:   |.::
Zfish   153 ---DATRGN-------PRSPQKPIVRVFLPNK----------QR---TVVPARCGMTVRDSLKKA 194

  Fly   306 --------------HVQVDGEQLARNRLPTDPSPDSHSSTSSDIFVDPNTNASSGGSSSNVLMVP 356
                          .|| |||     :.|.....|....|..::.|:...|            ||
Zfish   195 LMMRGLIPECCAVYRVQ-DGE-----KKPIGWDTDISWLTGEELHVEVLEN------------VP 241

  Fly   357 CSPGVGHVGMGHAIKHRFTKALGF-MATCTLCQKQVFHRWMKCTDCKYICHKSCAPHVPPSCGLP 420
            .:            .|.|.:...| :|.|..|:|.:| :..:|..|.|..|:.|:..||..| :.
Zfish   242 LT------------THNFVRKTFFTLAFCDFCRKLLF-QGFRCQTCGYKFHQRCSTEVPLMC-VN 292

  Fly   421 REYVDEFRHIKEQGGYASLPHVHG-------AAKGSPLVKKSTLGKPLHQQHGDSSSPSSSCTSS 478
            .:.:|..        .||...||.       :::|:..:.:.....|..:..|....|:.|.:.|
Zfish   293 YDQLDLL--------LASKFLVHHPITQEEVSSEGTTPISEMCPSLPPSESTGSLCHPTVSPSKS 349

  Fly   479 TPSSPALFQQRERELDQAGSSSSANLLPTPSLGKHQPSQFNFPNVTVTSSGGSGGVSLISNEPVP 543
            .|...:.....|...:|.|....::..|...:...:|  .|..:: :...|      |..::..|
Zfish   350 IPIPQSFRPGEEDHRNQFGQRDRSSSAPNVHINTIEP--VNIDDL-IRDQG------LPRSDGAP 405

  Fly   544 EQFPTAPATANGGLDS--LVSSSNGHMSSLI----------GSQTS-NASTAATLTGSLVNSTTT 595
            .|.|......|....|  |:||   |.:.::          ||.|. :|:..|:|.|||.|...:
Zfish   406 SQHPARCLRKNRTRTSSPLLSS---HPNDIVFDFEPEPVFRGSTTGLSATPPASLPGSLPNVKVS 467

  Fly   596 TSTCSFFPRKLSTAGVDKRTPFTSEYTDTHKSNDSDKTVSLSGSASTDSDRTPVRVDSTEDGDSG 660
            .|.|.  ||        :|.|.:|       |.|.:|..:|.            |.||::|    
Zfish   468 KSPCQ--PR--------ERKPSSS-------SEDRNKMKTLG------------RRDSSDD---- 499

  Fly   661 QWRQNSISLKEWDIPYGDLLLLERIGQGRFGTVHRALWHGDVAVKLLNEDYLQDEHMLETFRSEV 725
                       |:||.|.:.|.:|||.|.||||::..||||||||:||.. ......|:.|::||
Zfish   500 -----------WEIPEGQITLGQRIGSGSFGTVYKGKWHGDVAVKMLNVT-APTPQQLQAFKNEV 552

  Fly   726 ANFKNTRHENLVLFMGACMNPPYLAIVTSLCKGNTLYTYIHQRREKFAMNRTLLIAQQIAQGMGY 790
            ...:.|||.|::|||| ....|.|||||..|:|::||.::|....||.|.:.:.||:|.||||.|
Zfish   553 GVLRKTRHVNILLFMG-YTTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 616

  Fly   791 LHAREIIHKDLRTKNIFI-ENGKVIITDFGLFSSTKLLYCDMGLGVPHNW------------LCY 842
            |||:.|||:||::.|||: |:..|.|.||||.:            |...|            :.:
Zfish   617 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT------------VKSRWSGSHQFEQLSGSILW 669

  Fly   843 LAPELIRALQPEKPRGECLEFTPYSDVYSFGTVWYELICGEFTFKD-QPAESIIWQVGRG-MKQS 905
            :|||:|| ||.:.|      ::..||||:||.|.|||:.|...:.: ...:.||:.|||| :...
Zfish   670 MAPEVIR-LQDKNP------YSFQSDVYAFGIVLYELMSGALPYSNINNRDQIIFMVGRGYLSPD 727

  Fly   906 LANLQSG--RDVKDLLMLCWTYEKEHRPQFARLLSLLEHLPKK--RLARSPSHPVNLSRS 961
            |:.::|.  :.:|.|:..|...::|.||.|.::|:.:|.|.:.  ::.||.|.| :|:|:
Zfish   728 LSKVRSNCPKAMKRLMADCLKKKREERPLFPQILASIELLARSLPKIHRSASEP-SLNRA 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ksrNP_001287177.1 KSR1-SAM 33..166 CDD:290277 11/46 (24%)
C1_1 368..419 CDD:278556 16/51 (31%)
PK_KSR 678..946 CDD:270965 110/284 (39%)
Pkinase_Tyr 679..940 CDD:285015 108/277 (39%)
brafNP_001311445.1 Raf_RBD 166..237 CDD:176411 19/89 (21%)
C1_1 245..290 CDD:278556 15/45 (33%)
Pkinase_Tyr 507..764 CDD:285015 108/277 (39%)
STKc_Raf 513..765 CDD:270964 106/272 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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