DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ksr and araf

DIOPT Version :9

Sequence 1:NP_001287177.1 Gene:ksr / 40660 FlyBaseID:FBgn0015402 Length:966 Species:Drosophila melanogaster
Sequence 2:NP_991306.1 Gene:araf / 403063 ZFINID:ZDB-GENE-050102-2 Length:608 Species:Danio rerio


Alignment Length:621 Identity:174/621 - (28%)
Similarity:269/621 - (43%) Gaps:157/621 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 HRFTKALGF-MATCTLCQKQVFHRWMKCTDCKYICHKSCAPHVPPSCGLPREYVDEFRHIKEQGG 435
            |.|.:...| :|.|..|.|.:|:.: :|..|.|..|:.|:..||..|                  
Zfish   103 HNFVRKTFFKLAYCDFCHKFLFNGF-RCQTCGYKFHQHCSSKVPTVC------------------ 148

  Fly   436 YASLPHVHGAAKGSPLVKKSTLGKPLHQQHGDSSSPSSSCTSSTPSSPALFQQRERELDQAGSSS 500
                            |...|:.|              .|.::|...||:.      :..|.:|.
Zfish   149 ----------------VDMDTMTK--------------RCVNNTEDCPAIL------IYPATNSI 177

  Fly   501 SANLLPTPSLGKHQPSQFNFPNVTVTSSGGSGGVSLISNEPVPEQFPTAPAT------ANGGLDS 559
            |.:.||                :|..|.||              :.|::|:.      ...| .|
Zfish   178 SQSDLP----------------LTSDSPGG--------------ELPSSPSNFCLFIRGEDG-QS 211

  Fly   560 L-----VSSSNGHMSSLIG-------SQTSNASTAATLTGSLVNSTTTTSTCSFFPRKLSTAGVD 612
            |     .|:.|.||.|.:.       .:....||.|:.||...:...:||     |..|.:.|  
Zfish   212 LQRHRSTSTPNVHMVSTLEPGAAGLLEEPFKISTVASYTGYESSPKPSTS-----PPHLGSPG-- 269

  Fly   613 KRTPFTSEYTDTHKSNDSDKTVSLSGSASTDSDRTPVRVDSTEDGDSGQWRQNSISLKEWDIPYG 677
            ::.|.:.......|.:.||             |:..|.        .|.:|.:|.   .|::...
Zfish   270 RKPPKSPSEPKERKQSSSD-------------DKKKVH--------RGGYRDSSY---YWEVHPR 310

  Fly   678 DLLLLERIGQGRFGTVHRALWHGDVAVKLLNEDYLQDEHMLETFRSEVANFKNTRHENLVLFMGA 742
            ::.:|:|||.|.||||.:..||||||:|:|.......| .|:.|::|:...:.|||.|::|||| 
Zfish   311 EVSMLKRIGAGSFGTVFKGKWHGDVAIKILKVTEPTPE-QLQAFKNEMQVLRKTRHVNILLFMG- 373

  Fly   743 CMNPPYLAIVTSLCKGNTLYTYIHQRREKFAMNRTLLIAQQIAQGMGYLHAREIIHKDLRTKNIF 807
            .|..|..||:|..|:|::||.::|....||...|.:.:|:|.||||.||||:.|||:||::.|||
Zfish   374 FMTRPNFAIITQWCEGSSLYRHLHVTETKFDTMRRIDVARQTAQGMDYLHAKNIIHRDLKSNNIF 438

  Fly   808 IENG-KVIITDFGLFSSTKLLYCDMGLGVPHNWLCYLAPELIRALQPEKPRGECLEFTPYSDVYS 871
            :..| .|.|.||||.:..........:..|...:.::|||:|| :|...|      :|..||||.
Zfish   439 LHEGWTVKIGDFGLATVKSRWSGSQQVEQPSGSILWMAPEVIR-MQDTNP------YTFQSDVYG 496

  Fly   872 FGTVWYELICGEFTFKD-QPAESIIWQVGRG-MKQSLANLQSG--RDVKDLLMLCWTYEKEHRPQ 932
            :|.|.|||:.|...:.: ...:.||:.|||| :...|:.|.|.  :.:|.|::.|..::::.||.
Zfish   497 YGVVLYELMSGTLPYSNINNRDQIIFMVGRGYLSPDLSKLYSNCPKSMKRLIIDCLKFKRDERPL 561

  Fly   933 FARLLSLLEH----LPKKRLARSPSHPVNLSRSAES 964
            |.::|..:|.    |||  :.||.|.| :|.|:..:
Zfish   562 FPQILVSIEQVQELLPK--IERSASEP-SLHRAVHA 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ksrNP_001287177.1 KSR1-SAM 33..166 CDD:290277
C1_1 368..419 CDD:278556 16/47 (34%)
PK_KSR 678..946 CDD:270965 105/276 (38%)
Pkinase_Tyr 679..940 CDD:285015 102/265 (38%)
arafNP_991306.1 Raf_RBD 24..95 CDD:176411
C1 103..148 CDD:237996 15/45 (33%)
STKc_A-Raf 311..575 CDD:271052 103/272 (38%)
Pkinase 315..566 CDD:278497 101/259 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.