DRSC/TRiP Functional Genomics Resources

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Protein Alignment ksr and Ripk3

DIOPT Version :10

Sequence 1:NP_524236.2 Gene:ksr / 40660 FlyBaseID:FBgn0015402 Length:966 Species:Drosophila melanogaster
Sequence 2:NP_647558.2 Gene:Ripk3 / 246240 RGDID:628899 Length:478 Species:Rattus norvegicus


Alignment Length:296 Identity:82/296 - (27%)
Similarity:127/296 - (42%) Gaps:56/296 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   665 NSISLKEWDIPYGDLLLLERIGQGRFGTVHRA---LWHGDVAVKLLNEDYLQDEHMLETFRSEVA 726
            :||||    :...:|..|..:|:|.||.|.||   .|:.|||||::|.         :....||.
  Rat    12 SSISL----VGSEELENLGFVGKGGFGAVFRARHTAWNLDVAVKIVNS---------KKISREVK 63

  Fly   727 NFKNTRHENLVLFMGACMNPPY-----LAIVTSLCKGNTLYTYIHQR--REKFAMNRTLLIAQQI 784
            ...|.||||::|.:|...|..:     .|:||...:..:|...:...  |....:.|.|   :::
  Rat    64 AMVNLRHENVLLLLGVTENLEWDYVYGPALVTGFMENGSLSGLLQPSCPRPWPLLCRLL---EEV 125

  Fly   785 AQGMGYLHA--REIIHKDLRTKNIFIE---NGKVIITDFGL--FSSTKLLYCDMGLGVPHNWLCY 842
            ..||.|||:  ..::|:||:..|:.::   :.|  :.||||  |..........|.......|.|
  Rat   126 VLGMCYLHSLNPSLLHRDLKPSNVLLDPELHAK--LADFGLSTFQGGSQSGSGSGSRDSGGTLAY 188

  Fly   843 LAPELIRALQPEKPRGECLEFTPYSDVYSFGTVWYELICG---EFTFKDQPAESIIWQVGRGMKQ 904
            |||||:      ...|:.   :..|||||||.:.:.::.|   |...|.......:  ..|..:.
  Rat   189 LAPELL------DNDGKA---SKASDVYSFGVLVWTVLAGREAEVVDKTSLIRGAV--CNRQRRP 242

  Fly   905 SLANLQSG-------RDVKDLLMLCWTYEKEHRPQF 933
            .|..|...       ..:|:|:..||:.|.:.||.|
  Rat   243 PLTELPPDSPETPGLEGLKELMTHCWSSEPKDRPSF 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ksrNP_524236.2 SAM_KSR1_N 33..86 CDD:466555
SAM_KSR1 92..166 CDD:463916
C1_KSR 370..418 CDD:410362
PK_KSR 678..946 CDD:270965 78/283 (28%)
Ripk3NP_647558.2 Protein Kinases, catalytic domain 28..285 CDD:473864 76/276 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 311..330
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 362..429
RIP homotypic interaction motif (RHIM). /evidence=ECO:0000250|UniProtKB:Q9Y572 437..461
RHIM 438..458 CDD:463679
Blue background indicates that the domain is not in the aligned region.

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