DRSC/TRiP Functional Genomics Resources

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Protein Alignment ksr and ksr-2

DIOPT Version :9

Sequence 1:NP_001287177.1 Gene:ksr / 40660 FlyBaseID:FBgn0015402 Length:966 Species:Drosophila melanogaster
Sequence 2:NP_001021518.1 Gene:ksr-2 / 173085 WormBaseID:WBGene00002240 Length:550 Species:Caenorhabditis elegans


Alignment Length:580 Identity:166/580 - (28%)
Similarity:261/580 - (45%) Gaps:146/580 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   468 SSSPSSSCTSSTPSSPALFQQRERELDQAGSSSSANLLPTPSLGKHQPSQFNFPNVTVTSSGGSG 532
            :||.||...|||..|   ..|..|...:..:|||..          ..:..|.|..|.|||  |.
 Worm    19 TSSFSSWRRSSTSGS---ISQSSRTTSKTTTSSSVT----------SSNPINAPPPTATSS--SS 68

  Fly   533 GVSLISNEPVPEQFPTAPATA-------------------------------------------- 553
            .:...|:||.|      ||:|                                            
 Worm    69 VLPSTSSEPPP------PASAPPRISIYHKMVPSKSKFRQCDVCEHIFIFDFVRKQHLDDVYACN 127

  Fly   554 -------NGGLDSLVSS---SNGHMSSLIGS---QTSNASTAATLTGSLVNSTTTTSTCSFFPRK 605
                   .|.||.:.:.   :..:|..::.:   |::........|.|:..|.||:.||| ....
 Worm   128 VCGIRVHKGCLDRVKNDCKITTQYMGGILENAVIQSNKKQWEKPTTASISKSLTTSPTCS-TSTT 191

  Fly   606 LSTAGVDKRTPFTSEYTDTHKSNDSDKTVSLSGSASTDSDRTPVRVDSTEDGDSG----QWRQNS 666
            :|.|||:|         :.||:.   |.:|:  :.||..|.|....:..|:.|..    .|...:
 Worm   192 MSPAGVEK---------NVHKTR---KLISM--TTSTLDDVTTFNSEINEEMDEETVLMTWEDVT 242

  Fly   667 ISLKEWDIPYGDLLLLERIGQGRFGTVHRALWHGDVAVKLLNEDYL-QDEHMLETFRSEVAN-FK 729
            |.|.:.|:       :.:||.||||:|:...:||:.||:.:|.:|| |::...:.|.:|:.: :|
 Worm   243 IKLTDVDV-------MTKIGDGRFGSVYFGGYHGNAAVRFVNMNYLSQEDRRADVFATEIVSAYK 300

  Fly   730 NTRHENLVLFMGACMNP---PYLAIVTSLCKGNTLYTYIH-QRREKFAMNRTLLIAQQIAQGMGY 790
            |:||:::.||.|...:|   .| ||||:..:.||||..|| |..|.|..:.|..|:.||.|.|.|
 Worm   301 NSRHDHIALFYGYVSDPVTNTY-AIVTNFYQHNTLYHRIHEQLSEDFDQSWTFQISLQICQAMSY 364

  Fly   791 LHAREIIHKDLRTKNIFIEN-GKVIITDFGLFSSTKL----LYCDMGLGVPHNWLCYLAPELIRA 850
            ||.::|:|:|||||||.::| .:|::|||.|....:|    ..|.  |.:|::|:.||:||:...
 Worm   365 LHKKKILHRDLRTKNILLDNPNRVVVTDFALMKLERLENPRRNCT--LLIPNHWIDYLSPEIAGN 427

  Fly   851 LQPEKPRGEC-----LEFTPYSDVYSFGTVWYELICGEFTFKDQPAESIIWQVGR-----GMKQS 905
            |..:. ||:.     |.|:..||||||||:::||:     .:..|.....|....     |.|.:
 Worm   428 LMIDW-RGDVLFQHELPFSQESDVYSFGTIFFELL-----LRRMPTGCDSWDQKLYAKMCGQKAA 486

  Fly   906 LANLQS------GRDVKDLLMLCWTYEKEHRPQFARLLS-LLEHLPK----KRLARSPSH 954
            |..|.:      |: :.:||:.||:.:.|.||.|.:::. :...:|:    |:..||.:|
 Worm   487 LQRLDAQLQKIDGK-LHELLLECWSSQPEKRPSFQQIVKRITVQMPRKESNKQKRRSTAH 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ksrNP_001287177.1 KSR1-SAM 33..166 CDD:290277
C1_1 368..419 CDD:278556
PK_KSR 678..946 CDD:270965 103/299 (34%)
Pkinase_Tyr 679..940 CDD:285015 102/288 (35%)
ksr-2NP_001021518.1 C1 <103..145 CDD:294036 3/41 (7%)
PK_KSR 247..533 CDD:270965 104/302 (34%)
Pkinase_Tyr 253..526 CDD:285015 102/282 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4491
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D146946at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14357
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23257
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3270
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.000

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