DRSC/TRiP Functional Genomics Resources

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Protein Alignment ksr and Raf1

DIOPT Version :10

Sequence 1:NP_524236.2 Gene:ksr / 40660 FlyBaseID:FBgn0015402 Length:966 Species:Drosophila melanogaster
Sequence 2:NP_001343262.1 Gene:Raf1 / 110157 MGIID:97847 Length:668 Species:Mus musculus


Alignment Length:153 Identity:40/153 - (26%)
Similarity:53/153 - (34%) Gaps:44/153 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VPTRIAPPPPIKEASCPNLPQIRIHDPLVFSVISEQTEQASTFPTDIPAAETAPSQKLNSECGIE 111
            :|....||||.||:.|       |.|.|:.|            |.|:...:..     .::.|.|
Mouse   853 LPPPPPPPPPKKESDC-------IWDQLMAS------------PRDLRIGDID-----FTDLGDE 893

  Fly   112 KKQPTVTAPVTIDSSSTAEQEPPQKTQSTSVLPNVSPF---PTPPP-----VPPKPTHLMARMDS 168
            ..|..:.:. ::.||...:..||........||...|.   |.|||     |||.|         
Mouse   894 DDQDVLDSG-SLYSSGDLQAPPPPPPPCPFNLPAPPPMFGCPPPPPVFSIRVPPPP--------- 948

  Fly   169 QCSGQQA--KTSSKAENPVSSAK 189
            .|...||  ....|||.|:...|
Mouse   949 PCFSNQAPPPPEMKAELPLFQKK 971

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ksrNP_524236.2 SAM_KSR1_N 33..86 CDD:466555 12/38 (32%)
SAM_KSR1 92..166 CDD:463916 19/81 (23%)
C1_KSR 370..418 CDD:410362
PK_KSR 678..946 CDD:270965
Raf1NP_001343262.1 RBD_CRAF 55..131 CDD:340655
C1_A_C-Raf 136..187 CDD:410420
STKc_C-Raf 356..638 CDD:271051
Blue background indicates that the domain is not in the aligned region.

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