DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ksr and Braf

DIOPT Version :9

Sequence 1:NP_001287177.1 Gene:ksr / 40660 FlyBaseID:FBgn0015402 Length:966 Species:Drosophila melanogaster
Sequence 2:XP_011239436.1 Gene:Braf / 109880 MGIID:88190 Length:917 Species:Mus musculus


Alignment Length:908 Identity:240/908 - (26%)
Similarity:374/908 - (41%) Gaps:239/908 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 LEQSLRLSDEEIRQLL------ADSPS---QREEEELRRLTRAMQNLRKCMESLESGTAASNNDP 183
            ::|.::|:.|.|..||      .:.||   :..||...:|....|..::.:||            
Mouse   144 IKQMIKLTQEHIEALLDKFGGEHNPPSIYLEAYEEYTSKLDALQQREQQLLES------------ 196

  Fly   184 EQWHWDSWDRPTHIHRGSVGNIGLGNNSTASPRTHHRQHGVKGKNSALANSTNFKSGRQSPSATE 248
                                   |||                |.:.::::|.:..:...|.|:: 
Mouse   197 -----------------------LGN----------------GADFSVSSSASMDTVTSSSSSS- 221

  Fly   249 ELNSTQGSQLTLTLTPSPP--NSPFTPSSGLSSSLNGTPQRSRGTPPPARKHQTL---LSQS--- 305
              .|...|.|::..||:..  |:|.:|...:........||   |..|||...|:   |.::   
Mouse   222 --LSVLPSSLSVFQTPTDASRNNPKSPQKPIVRVFLPNKQR---TVVPARCGVTVRDSLKKALMM 281

  Fly   306 -----------HVQVDGEQLARNRLPTDPSPDSHSSTSSDIFVDPNTNASSGGSSSNVLMVPCSP 359
                       .:| ||..|.:..:..|  .|....|..::.|:...|            ||.: 
Mouse   282 RGLIPECCAVYRIQ-DGYGLEKKPIGWD--TDISWLTGEELHVEVLEN------------VPLT- 330

  Fly   360 GVGHVGMGHAIKHRFTKALGF-MATCTLCQKQVFHRWMKCTDCKYICHKSCAPHVPPSC----GL 419
                       .|.|.:...| :|.|..|:|.:| :..:|..|.|..|:.|:..||..|    .|
Mouse   331 -----------THNFVRKTFFTLAFCDFCRKLLF-QGFRCQTCGYKFHQRCSTEVPLMCVNYDQL 383

  Fly   420 PREYVDE-FRHIKEQGGYASLPHVHGAAKGSPLVKKSTLGKPLHQQHGDSSSPSSSCTSSTPSSP 483
            ...:|.: |.|.......||.|.. ....||.....|....|   |...|.|||.|.....|..|
Mouse   384 DLLFVSKFFEHHPVPQEEASFPET-ALPSGSSSAPPSDSTGP---QILTSPSPSKSIPIPQPFRP 444

  Fly   484 A------LFQQRERELDQAGSSSSANLLPTPSLGKHQPSQFNFPNVTVTSSGGSGGVSLISNEPV 542
            |      .|.||:|       ||||                  |||.:.:.           |||
Mouse   445 ADEDHRNQFGQRDR-------SSSA------------------PNVHINTI-----------EPV 473

  Fly   543 --PEQFPTAPATANGGL--DSLVSSSNGHMSSLIGSQTSNASTAATLTGSLVNSTTTTSTCSFFP 603
              .|:||.........|  |.........::.|:.......|...:   .|::|..:.....|.|
Mouse   474 NIDEKFPEVELQDQRDLIRDQGFRGDGAPLNQLMRCLRKYQSRTPS---PLLHSVPSEIVFDFEP 535

  Fly   604 RKL---STAGVDKRTPFTSEYTDTH----KSNDSDKTVSLSGSASTDSDRTPV----RVDSTEDG 657
            ..:   ||.|:....|.:...:.|:    :.:...:....|.|:|:..||:.:    |.||::| 
Mouse   536 GPVFRGSTTGLSATPPASLPGSLTNVKALQKSPGPQRERKSSSSSSSEDRSRMKTLGRRDSSDD- 599

  Fly   658 DSGQWRQNSISLKEWDIPYGDLLLLERIGQGRFGTVHRALWHGDVAVKLLNEDYLQDEHMLETFR 722
                          |:||.|.:.:.:|||.|.||||::..||||||||:||.. ......|:.|:
Mouse   600 --------------WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVT-APTPQQLQAFK 649

  Fly   723 SEVANFKNTRHENLVLFMGACMNPPYLAIVTSLCKGNTLYTYIHQRREKFAMNRTLLIAQQIAQG 787
            :||...:.|||.|::|||| ....|.|||||..|:|::||.::|....||.|.:.:.||:|.|||
Mouse   650 NEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 713

  Fly   788 MGYLHAREIIHKDLRTKNIFI-ENGKVIITDFGLFSSTKLLYCDMGLGVPHNW------------ 839
            |.||||:.|||:||::.|||: |:..|.|.||||.:            |...|            
Mouse   714 MDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT------------VKSRWSGSHQFEQLSGS 766

  Fly   840 LCYLAPELIRALQPEKPRGECLEFTPYSDVYSFGTVWYELICGEFTFKD-QPAESIIWQVGRG-M 902
            :.::|||:|| :|.:.|      ::..||||:||.|.|||:.|:..:.: ...:.||:.|||| :
Mouse   767 ILWMAPEVIR-MQDKNP------YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 824

  Fly   903 KQSLANLQSG--RDVKDLLMLCWTYEKEHRPQFARLLSLLEHLPKK--RLARSPSHPVNLSRS 961
            ...|:.::|.  :.:|.|:..|...:::.||.|.::|:.:|.|.:.  ::.||.|.| :|:|:
Mouse   825 SPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHRSASEP-SLNRA 886

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ksrNP_001287177.1 KSR1-SAM 33..166 CDD:290277 12/46 (26%)
C1_1 368..419 CDD:278556 16/55 (29%)
PK_KSR 678..946 CDD:270965 107/284 (38%)
Pkinase_Tyr 679..940 CDD:285015 105/277 (38%)
BrafXP_011239436.1 RBD_BRAF 248..329 CDD:340654 18/98 (18%)
C1_1 332..377 CDD:365894 15/45 (33%)
STKc_Raf 613..865 CDD:270964 104/272 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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