DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hcs and HCS2

DIOPT Version :9

Sequence 1:NP_001287175.1 Gene:Hcs / 40659 FlyBaseID:FBgn0037332 Length:1047 Species:Drosophila melanogaster
Sequence 2:NP_001320617.1 Gene:HCS2 / 840632 AraportID:AT1G37150 Length:344 Species:Arabidopsis thaliana


Alignment Length:303 Identity:89/303 - (29%)
Similarity:154/303 - (50%) Gaps:45/303 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   751 DDKPPVANNNVLPI----------------LIHSCPDDFSTVDYFDNLKTEHIGRLVIYAPVVSS 799
            |....:.|||||.:                |:......|:...:.:::.|...||.:|::|.:||
plant    20 DTATRLKNNNVLKLPDNSKVSIFLQSEIKNLVRDDDSSFNLSLFMNSISTHRFGRFLIWSPYLSS 84

  Fly   800 SMHLINNLELIHGLAVLPVQ-------QTSGVGRRNNQWLSPPGCAMFSLQLHLTMDSALSSRLP 857
            :..:::     |..:.:||.       |..|.||..|.|.||.||.|:|..|.:. |..:   :|
plant    85 THDVVS-----HNFSEIPVGSVCVSDIQLKGRGRTKNVWESPKGCLMYSFTLEME-DGRV---VP 140

  Fly   858 LLQHLVGTAIVNSLRS-HEEYGVL--DISIKWPNDIYANGNQKIGGLVINTTLQGSQAIVNIGSG 919
            |:|::|..|:..:::. .::.|:.  |:.||||||:|.|| .||||::..:|.:..:.:|::|.|
plant   141 LIQYVVSLAVTEAVKDVCDKKGLSYNDVKIKWPNDLYLNG-LKIGGILCTSTYRSRKFLVSVGVG 204

  Fly   920 INLNNSRPTVCINDLIREYNTRVPNNKLPILKYELLIAMIFNEIERLLGEVQNGDFDSFYALYYS 984
            :|::|.:||.|:|.::::  ...|:|   :||.|.::...|.:.|..........|.|...|||.
plant   205 LNVDNEQPTTCLNAVLKD--VCPPSN---LLKREEILGAFFKKFENFFDLFMEQGFKSLEELYYR 264

  Fly   985 LWLHSGQSVKICLQKDQEKEAE-IVGIDDFGFLEVKLPTGTIE 1026
            .||||||.| |..:|::::..: :|.|.  |:.|......|:|
plant   265 TWLHSGQRV-IAEEKNEDQVVQNVVTIQ--GWSEENYEPETLE 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HcsNP_001287175.1 HC2 293..437 CDD:284736
GAT_1 456..>509 CDD:294025
BPL_LplA_LipB 793..921 CDD:301309 44/137 (32%)
BirA2 812..1037 CDD:223417 73/226 (32%)
BPL_C 988..1037 CDD:280411 13/40 (33%)
HCS2NP_001320617.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 71 1.000 Domainoid score I3357
eggNOG 1 0.900 - - E1_COG0340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1392751at2759
OrthoFinder 1 1.000 - - FOG0003219
OrthoInspector 1 1.000 - - otm2925
orthoMCL 1 0.900 - - OOG6_100546
Panther 1 1.100 - - O PTHR12835
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2178
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.820

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