DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hcs and HCS1

DIOPT Version :9

Sequence 1:NP_001287175.1 Gene:Hcs / 40659 FlyBaseID:FBgn0037332 Length:1047 Species:Drosophila melanogaster
Sequence 2:NP_565605.1 Gene:HCS1 / 817112 AraportID:AT2G25710 Length:367 Species:Arabidopsis thaliana


Alignment Length:372 Identity:105/372 - (28%)
Similarity:180/372 - (48%) Gaps:67/372 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   719 AKFELLEKL---------RLRCSGSDNVI-ATPNLTMKFCGKDD-KPPVA----NNNVLPI---- 764
            :.|.||..|         ||..|.|.:.: :..:.::..|||.. :..||    |.|.|.:    
plant    11 SNFHLLNILVLRSLKPLHRLSFSFSASAMESDASCSLVLCGKSSVETEVAKGLKNKNSLKLPDNT 75

  Fly   765 ------------LIHSCPDDFSTVDYFDNLKTEHIGRLVIYAPVVSSSMHLINNLELIHGLAVLP 817
                        |:....:.|:...:.:::.|...||.:|::|.:||:..:::     |..:.||
plant    76 KVSLILESEAKNLVKDDDNSFNLSLFMNSIITHRFGRFLIWSPRLSSTHDVVS-----HNFSELP 135

  Fly   818 VQ-------QTSGVGRRNNQWLSPPGCAMFSLQLHLTMDSALSSRLPLLQHLVGTAIVNSLRS-H 874
            |.       |..|.||..|.|.||.||.|:|..|.:. |..:   :||:|::|..|:..:::. .
plant   136 VGSVCVTDIQFKGRGRTKNVWESPKGCLMYSFTLEME-DGRV---VPLIQYVVSLAVTEAVKDVC 196

  Fly   875 EEYGV--LDISIKWPNDIYANGNQKIGGLVINTTLQGSQAIVNIGSGINLNNSRPTVCINDLIRE 937
            ::.|:  :|:.||||||:|.|| .|:||::..:|.:..:..|::|.|:|::|.:||.|:|.::: 
plant   197 DKKGLPYIDVKIKWPNDLYVNG-LKVGGILCTSTYRSKKFNVSVGVGLNVDNGQPTTCLNAVLK- 259

  Fly   938 YNTRVPNNKLPILKYELLIAMIFNEIERLLGEVQNGDFDSFYALYYSLWLHSGQSVKICLQKDQE 1002
              ...|.:.|  ||.|.::...|::.|:......:..|.|...|||..||||.|.|.:    :.:
plant   260 --GMAPESNL--LKREEILGAFFHKFEKFFDLFMDQGFKSLEELYYRTWLHSEQRVIV----EDK 316

  Fly  1003 KEAEIV-------GIDDFGFLEVKLPTGTIEIVQPDGNSFDMLKGLI 1042
            .|.::|       |:...|:|........:..:.|||||||..|||:
plant   317 VEDQVVQNVVTIQGLTSSGYLLAVGDDNQMYELHPDGNSFDFFKGLV 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HcsNP_001287175.1 HC2 293..437 CDD:284736
GAT_1 456..>509 CDD:294025
BPL_LplA_LipB 793..921 CDD:301309 44/137 (32%)
BirA2 812..1037 CDD:223417 75/241 (31%)
BPL_C 988..1037 CDD:280411 15/55 (27%)
HCS1NP_565605.1 BirA2 118..359 CDD:223417 80/259 (31%)
BPL_C 306..360 CDD:280411 16/57 (28%)
BPL_LplA_LipB 116..244 CDD:281140 44/137 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 71 1.000 Domainoid score I3357
eggNOG 1 0.900 - - E1_COG0340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1392751at2759
OrthoFinder 1 1.000 - - FOG0003219
OrthoInspector 1 1.000 - - otm2925
orthoMCL 1 0.900 - - OOG6_100546
Panther 1 1.100 - - LDO PTHR12835
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2178
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.820

Return to query results.
Submit another query.